The naming of names: guidelines for gene nomenclature in Marchantia

John L. Bowman; Takashi Araki; Mario A. Arteaga-Vazquez; Frederic Berger; Liam Dolan; Jim Haseloff; Kimitsune Ishizaki; Junko Kyozuka; Shih-Shun Lin; Hideki Nagasaki; Hirofumi Nakagami; Keiji Nakajima; Yasukazu Nakamura; Kyoko Ohashi-Ito; Shinichiro Sawa; Masaki Shimamura; Roberto Solano; Hirokazu Tsukaya; Takashi Ueda; Yuichiro Watanabe; Katsuyuki T. Yamato; Sabine Zachgo; Takayuki Kohchi

doi:10.1093/pcp/pcv193

The naming of names: guidelines for gene nomenclature in Marchantia

John L. Bowman, Takashi Araki, Mario A. Arteaga-Vazquez, Frederic Berger, Liam Dolan, Jim Haseloff, Kimitsune Ishizaki, Junko Kyozuka, Shih-Shun Lin, Hideki Nagasaki, Hirofumi Nakagami, Keiji Nakajima, Yasukazu Nakamura, Kyoko Ohashi-Ito, Shinichiro Sawa, Masaki Shimamura, Roberto Solano, Hirokazu Tsukaya, Takashi Ueda, Yuichiro WatanabeKatsuyuki T. Yamato, Sabine Zachgo, Takayuki Kohchi

School of Biological Sciences

Research output: Contribution to journal › Article › Research › peer-review

51 Citations (Scopus)

Abstract

While Marchantia polymorpha has been utilized as a model system to investigate fundamental biological questions for over almost two centuries, there is renewed interest in M. polymorpha as a model genetic organism in the genomics era. Here we outline community guidelines for M. polymorpha gene and transgene nomenclature, and we anticipate that these guidelines will promote consistency and reduce both redundancy and confusion in the scientific literature.

Original language	English
Pages (from-to)	257-261
Number of pages	5
Journal	Plant & Cell Physiology
Volume	57
Issue number	2
DOIs	https://doi.org/10.1093/pcp/pcv193
Publication status	Published - 1 Feb 2016

Keywords

Gene nomenclature
Liverwort
Marchantia polymorpha
Model organism

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10.1093/pcp/pcv193

Cite this

Bowman, J. L., Araki, T., Arteaga-Vazquez, M. A., Berger, F., Dolan, L., Haseloff, J., Ishizaki, K., Kyozuka, J., Lin, S.-S., Nagasaki, H., Nakagami, H., Nakajima, K., Nakamura, Y., Ohashi-Ito, K., Sawa, S., Shimamura, M., Solano, R., Tsukaya, H., Ueda, T., ... Kohchi, T. (2016). The naming of names: guidelines for gene nomenclature in Marchantia. Plant & Cell Physiology, 57(2), 257-261. https://doi.org/10.1093/pcp/pcv193

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title = "The naming of names: guidelines for gene nomenclature in Marchantia",

abstract = "While Marchantia polymorpha has been utilized as a model system to investigate fundamental biological questions for over almost two centuries, there is renewed interest in M. polymorpha as a model genetic organism in the genomics era. Here we outline community guidelines for M. polymorpha gene and transgene nomenclature, and we anticipate that these guidelines will promote consistency and reduce both redundancy and confusion in the scientific literature.",

keywords = "Gene nomenclature, Liverwort, Marchantia polymorpha, Model organism",

author = "Bowman, {John L.} and Takashi Araki and Arteaga-Vazquez, {Mario A.} and Frederic Berger and Liam Dolan and Jim Haseloff and Kimitsune Ishizaki and Junko Kyozuka and Shih-Shun Lin and Hideki Nagasaki and Hirofumi Nakagami and Keiji Nakajima and Yasukazu Nakamura and Kyoko Ohashi-Ito and Shinichiro Sawa and Masaki Shimamura and Roberto Solano and Hirokazu Tsukaya and Takashi Ueda and Yuichiro Watanabe and Yamato, {Katsuyuki T.} and Sabine Zachgo and Takayuki Kohchi",

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doi = "10.1093/pcp/pcv193",

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Bowman, JL, Araki, T, Arteaga-Vazquez, MA, Berger, F, Dolan, L, Haseloff, J, Ishizaki, K, Kyozuka, J, Lin, S-S, Nagasaki, H, Nakagami, H, Nakajima, K, Nakamura, Y, Ohashi-Ito, K, Sawa, S, Shimamura, M, Solano, R, Tsukaya, H, Ueda, T, Watanabe, Y, Yamato, KT, Zachgo, S & Kohchi, T 2016, 'The naming of names: guidelines for gene nomenclature in Marchantia', Plant & Cell Physiology, vol. 57, no. 2, pp. 257-261. https://doi.org/10.1093/pcp/pcv193

TY - JOUR

T1 - The naming of names

T2 - guidelines for gene nomenclature in Marchantia

AU - Bowman, John L.

AU - Araki, Takashi

AU - Arteaga-Vazquez, Mario A.

AU - Berger, Frederic

AU - Dolan, Liam

AU - Haseloff, Jim

AU - Ishizaki, Kimitsune

AU - Kyozuka, Junko

AU - Lin, Shih-Shun

AU - Nagasaki, Hideki

AU - Nakagami, Hirofumi

AU - Nakajima, Keiji

AU - Nakamura, Yasukazu

AU - Ohashi-Ito, Kyoko

AU - Sawa, Shinichiro

AU - Shimamura, Masaki

AU - Solano, Roberto

AU - Tsukaya, Hirokazu

AU - Ueda, Takashi

AU - Watanabe, Yuichiro

AU - Yamato, Katsuyuki T.

AU - Zachgo, Sabine

AU - Kohchi, Takayuki

PY - 2016/2/1

Y1 - 2016/2/1

N2 - While Marchantia polymorpha has been utilized as a model system to investigate fundamental biological questions for over almost two centuries, there is renewed interest in M. polymorpha as a model genetic organism in the genomics era. Here we outline community guidelines for M. polymorpha gene and transgene nomenclature, and we anticipate that these guidelines will promote consistency and reduce both redundancy and confusion in the scientific literature.

AB - While Marchantia polymorpha has been utilized as a model system to investigate fundamental biological questions for over almost two centuries, there is renewed interest in M. polymorpha as a model genetic organism in the genomics era. Here we outline community guidelines for M. polymorpha gene and transgene nomenclature, and we anticipate that these guidelines will promote consistency and reduce both redundancy and confusion in the scientific literature.

KW - Gene nomenclature

KW - Liverwort

KW - Marchantia polymorpha

KW - Model organism

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DO - 10.1093/pcp/pcv193

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VL - 57

SP - 257

EP - 261

JO - Plant & Cell Physiology

JF - Plant & Cell Physiology

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ER -

The naming of names: guidelines for gene nomenclature in Marchantia

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Keywords

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Understanding the evolution of the alternation of generations in the land plant life cycle

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The naming of names: guidelines for gene nomenclature in Marchantia

Abstract

Keywords

Access to Document

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Understanding the evolution of the alternation of generations in the land plant life cycle

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