TY - JOUR
T1 - Synthesis and molecular docking studies of new dispiropyrrolidines on West Nile virus NS2B-NS3 protease
AU - Yusoff, Nadia Mohamed
AU - Osman, Hasnah
AU - Hassan, Mohd Zaheen
AU - Ali, Mohamed Ashraf
AU - Yoon, Yeong Keng
AU - Kamarulzaman, Ezatul Ezleen
AU - Ghani, Muhammad Solehin Abd
AU - Supratman, Unang
AU - Taib, Mohamad Nurul Azmi Mohamad
N1 - Funding Information:
Mohamed Yusoff, N. thanks to the Malaysian government for the scholarship (MyBrain15) and Universiti Sains Malaysia (USM) under grant no. [RUI 1001/PKIMIA/8011072] to financially support this research.
Publisher Copyright:
© 2021, Gadjah Mada University. All rights reserved.
PY - 2021
Y1 - 2021
N2 - West Nile virus (WNV) is among the other four flavivirus genus, rapidly spreading worldwide. The number of cases increases globally as there are no clinically available approved drugs and vaccines against this disease. Based on our previous finding related to a flavivirus, a series of spiropyrrolidine derivatives were regioselectively synthesized via [3+2]-cycloaddition reaction of three components between isatins, sarcosine, and (E)-3,5-bis (arylidene)-4-piperidones. The yield of synthesized compounds was in a range between 81–95%. The structures of all the synthesized compounds were characterized using FT-IR, 1D-and 2D-NMR, and HRMS. Molecular docking studies of spiropyrrolidines on NS2B-NS3 protease were done to understand and explore the ligandreceptor interactions and hypothesize the drug's refinements. The inhibition of NS2B-NS3 protease has been considered a promising strategy because this enzyme is responsible for the viral replication process. Among them, compound 5c shows an excellent binding affinity with ‒7.71 kcal/mol free binding energy and an inhibition constant of 1.73 μM. It also showed the binding orientation into the active site of WNV NS2B-NS3 protease on Asn84, Tyr1161, Gly1151, and Gly1153.
AB - West Nile virus (WNV) is among the other four flavivirus genus, rapidly spreading worldwide. The number of cases increases globally as there are no clinically available approved drugs and vaccines against this disease. Based on our previous finding related to a flavivirus, a series of spiropyrrolidine derivatives were regioselectively synthesized via [3+2]-cycloaddition reaction of three components between isatins, sarcosine, and (E)-3,5-bis (arylidene)-4-piperidones. The yield of synthesized compounds was in a range between 81–95%. The structures of all the synthesized compounds were characterized using FT-IR, 1D-and 2D-NMR, and HRMS. Molecular docking studies of spiropyrrolidines on NS2B-NS3 protease were done to understand and explore the ligandreceptor interactions and hypothesize the drug's refinements. The inhibition of NS2B-NS3 protease has been considered a promising strategy because this enzyme is responsible for the viral replication process. Among them, compound 5c shows an excellent binding affinity with ‒7.71 kcal/mol free binding energy and an inhibition constant of 1.73 μM. It also showed the binding orientation into the active site of WNV NS2B-NS3 protease on Asn84, Tyr1161, Gly1151, and Gly1153.
KW - Molecular docking
KW - Spiropyrrolidine
KW - West Nile virus
KW - WNV NS2B-NS3 protease
KW - [3+2]-cycloaddition
UR - http://www.scopus.com/inward/record.url?scp=85123786043&partnerID=8YFLogxK
U2 - 10.22146/IJC.66017
DO - 10.22146/IJC.66017
M3 - Article
AN - SCOPUS:85123786043
SN - 1411-9420
VL - 21
SP - 1431
EP - 1442
JO - Indonesian Journal of Chemistry
JF - Indonesian Journal of Chemistry
IS - 6
ER -