Strategies for Increasing Protein Stability

Peter G. Chandler, Sebastian S. Broendum, Blake T. Riley, Matthew A. Spence, Colin J. Jackson, Sheena McGowan, Ashley M. Buckle

Research output: Chapter in Book/Report/Conference proceedingChapter (Book)Otherpeer-review

Abstract

The stability of wild-type proteins is often a hurdle to their practical use in research, industry, and medicine. The route to engineering stability of a protein of interest lies largely with the available data. Where high-resolution structural data is available, rational design, based on fundamental principles of protein chemistry, can improve protein stability. Recent advances in computational biology and the use of nonnatural amino acids have also provided novel rational methods for improving protein stability. Likewise, the explosion of sequence and structural data available in public databases, in combination with improvements in freely available computational tools, has produced accessible phylogenetic approaches. Trawling modern sequence databases can identify the thermostable homologs of a target protein, and evolutionary data can be quickly generated using available phylogenetic tools. Grafting features from those thermostable homologs or ancestors provides stability improvement through a semi-rational approach. Further, molecular techniques such as directed evolution have shown great promise in delivering designer proteins. These strategies are well documented and newly accessible to the molecular biologist, allowing for rapid enhancements of protein stability.

Original languageEnglish
Title of host publicationProtein Nanotechnology
Subtitle of host publicationProtocols, Instrumentation, and Applications
EditorsJuliet A. Gerrard, Laura J. Domigan
Place of PublicationNew York, NY
PublisherHumana Press
Chapter10
Pages163-181
Number of pages19
ISBN (Electronic)9781493998692
ISBN (Print)9781493998685
DOIs
Publication statusPublished - 2020

Publication series

NameMethods in Molecular Biology
Volume2073
ISSN (Print)1064-3745
ISSN (Electronic)1940-6029

Keywords

  • Ancestral reconstruction
  • Consensus design
  • Directed evolution
  • Protein stability
  • Rational design
  • Semi-rational design

Cite this

Chandler, P. G., Broendum, S. S., Riley, B. T., Spence, M. A., Jackson, C. J., McGowan, S., & Buckle, A. M. (2020). Strategies for Increasing Protein Stability. In J. A. Gerrard, & L. J. Domigan (Eds.), Protein Nanotechnology: Protocols, Instrumentation, and Applications (pp. 163-181). (Methods in Molecular Biology; Vol. 2073). New York, NY: Humana Press. https://doi.org/10.1007/978-1-4939-9869-2_10
Chandler, Peter G. ; Broendum, Sebastian S. ; Riley, Blake T. ; Spence, Matthew A. ; Jackson, Colin J. ; McGowan, Sheena ; Buckle, Ashley M. / Strategies for Increasing Protein Stability. Protein Nanotechnology: Protocols, Instrumentation, and Applications. editor / Juliet A. Gerrard ; Laura J. Domigan. New York, NY : Humana Press, 2020. pp. 163-181 (Methods in Molecular Biology).
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Chandler, PG, Broendum, SS, Riley, BT, Spence, MA, Jackson, CJ, McGowan, S & Buckle, AM 2020, Strategies for Increasing Protein Stability. in JA Gerrard & LJ Domigan (eds), Protein Nanotechnology: Protocols, Instrumentation, and Applications. Methods in Molecular Biology, vol. 2073, Humana Press, New York, NY, pp. 163-181. https://doi.org/10.1007/978-1-4939-9869-2_10

Strategies for Increasing Protein Stability. / Chandler, Peter G.; Broendum, Sebastian S.; Riley, Blake T.; Spence, Matthew A.; Jackson, Colin J.; McGowan, Sheena; Buckle, Ashley M.

Protein Nanotechnology: Protocols, Instrumentation, and Applications. ed. / Juliet A. Gerrard; Laura J. Domigan. New York, NY : Humana Press, 2020. p. 163-181 (Methods in Molecular Biology; Vol. 2073).

Research output: Chapter in Book/Report/Conference proceedingChapter (Book)Otherpeer-review

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Chandler PG, Broendum SS, Riley BT, Spence MA, Jackson CJ, McGowan S et al. Strategies for Increasing Protein Stability. In Gerrard JA, Domigan LJ, editors, Protein Nanotechnology: Protocols, Instrumentation, and Applications. New York, NY: Humana Press. 2020. p. 163-181. (Methods in Molecular Biology). https://doi.org/10.1007/978-1-4939-9869-2_10