Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes

Yue Yuan, Yetunde A. Ayinuola, Damini Singh, Olawole Ayinuola, Jeffrey A. Mayfield, Adam Quek, James C. Whisstock, Ruby H.P. Law, Shaun W. Lee, Victoria A. Ploplis, Francis J. Castellino

Research output: Contribution to journalArticleResearchpeer-review

Abstract

VEK50 is a truncated peptide from a Streptococcal pyogenes surface human plasminogen (hPg) binding M-protein (PAM). VEK50 contains the full A-domain of PAM, which is responsible for its low nanomolar binding to hPg. The interaction of VEK50 with kringle 2, the PAM-binding domain in hPg (K2hPg), has been studied by high-resolution NMR spectroscopy. The data show that each VEK50 monomer in solution contains two tight binding sites for K2hPg, one each in the a1- (RH1; R17H18) and a2- (RH2; R30H31) repeats within the A-domain of VEK50. Two mutant forms of VEK50, viz., VEK50[RH1/AA] (VEK50ΔRH1) and VEK50[RH2/AA] (VEK50ΔRH2), were designed by replacing each RH with AA, thus eliminating one of the K2hPg binding sites within VEK50, and allowing separate study of each binding site. Using 13C- and 15N-labeled peptides, NMR-derived solution structures of VEK50 in its complex with K2hPg were solved. We conclude that the A-domain of PAM can accommodate two molecules of K2hPg docked within a short distance of each other, and the strength of the binding is slightly different for each site. The solution structure of the VEK50/K2hPg, complex, which is a reductionist model of the PAM/hPg complex, provides insights for the binding mechanism of PAM to a host protein, a process that is critical to S. pyogenes virulence.

Original languageEnglish
Pages (from-to)18-29
Number of pages12
JournalJournal of Structural Biology
Volume208
DOIs
Publication statusPublished - 1 Oct 2019

Keywords

  • 3-D solution structure
  • A-repeats
  • Bacterial receptor
  • Modular proteins
  • NMR structures
  • Peptide mutagenesis
  • Plasminogen binding

Cite this

Yuan, Yue ; Ayinuola, Yetunde A. ; Singh, Damini ; Ayinuola, Olawole ; Mayfield, Jeffrey A. ; Quek, Adam ; Whisstock, James C. ; Law, Ruby H.P. ; Lee, Shaun W. ; Ploplis, Victoria A. ; Castellino, Francis J. / Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes. In: Journal of Structural Biology. 2019 ; Vol. 208. pp. 18-29.
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abstract = "VEK50 is a truncated peptide from a Streptococcal pyogenes surface human plasminogen (hPg) binding M-protein (PAM). VEK50 contains the full A-domain of PAM, which is responsible for its low nanomolar binding to hPg. The interaction of VEK50 with kringle 2, the PAM-binding domain in hPg (K2hPg), has been studied by high-resolution NMR spectroscopy. The data show that each VEK50 monomer in solution contains two tight binding sites for K2hPg, one each in the a1- (RH1; R17H18) and a2- (RH2; R30H31) repeats within the A-domain of VEK50. Two mutant forms of VEK50, viz., VEK50[RH1/AA] (VEK50ΔRH1) and VEK50[RH2/AA] (VEK50ΔRH2), were designed by replacing each RH with AA, thus eliminating one of the K2hPg binding sites within VEK50, and allowing separate study of each binding site. Using 13C- and 15N-labeled peptides, NMR-derived solution structures of VEK50 in its complex with K2hPg were solved. We conclude that the A-domain of PAM can accommodate two molecules of K2hPg docked within a short distance of each other, and the strength of the binding is slightly different for each site. The solution structure of the VEK50/K2hPg, complex, which is a reductionist model of the PAM/hPg complex, provides insights for the binding mechanism of PAM to a host protein, a process that is critical to S. pyogenes virulence.",
keywords = "3-D solution structure, A-repeats, Bacterial receptor, Modular proteins, NMR structures, Peptide mutagenesis, Plasminogen binding",
author = "Yue Yuan and Ayinuola, {Yetunde A.} and Damini Singh and Olawole Ayinuola and Mayfield, {Jeffrey A.} and Adam Quek and Whisstock, {James C.} and Law, {Ruby H.P.} and Lee, {Shaun W.} and Ploplis, {Victoria A.} and Castellino, {Francis J.}",
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Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes. / Yuan, Yue; Ayinuola, Yetunde A.; Singh, Damini; Ayinuola, Olawole; Mayfield, Jeffrey A.; Quek, Adam; Whisstock, James C.; Law, Ruby H.P.; Lee, Shaun W.; Ploplis, Victoria A.; Castellino, Francis J.

In: Journal of Structural Biology, Vol. 208, 01.10.2019, p. 18-29.

Research output: Contribution to journalArticleResearchpeer-review

TY - JOUR

T1 - Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes

AU - Yuan, Yue

AU - Ayinuola, Yetunde A.

AU - Singh, Damini

AU - Ayinuola, Olawole

AU - Mayfield, Jeffrey A.

AU - Quek, Adam

AU - Whisstock, James C.

AU - Law, Ruby H.P.

AU - Lee, Shaun W.

AU - Ploplis, Victoria A.

AU - Castellino, Francis J.

PY - 2019/10/1

Y1 - 2019/10/1

N2 - VEK50 is a truncated peptide from a Streptococcal pyogenes surface human plasminogen (hPg) binding M-protein (PAM). VEK50 contains the full A-domain of PAM, which is responsible for its low nanomolar binding to hPg. The interaction of VEK50 with kringle 2, the PAM-binding domain in hPg (K2hPg), has been studied by high-resolution NMR spectroscopy. The data show that each VEK50 monomer in solution contains two tight binding sites for K2hPg, one each in the a1- (RH1; R17H18) and a2- (RH2; R30H31) repeats within the A-domain of VEK50. Two mutant forms of VEK50, viz., VEK50[RH1/AA] (VEK50ΔRH1) and VEK50[RH2/AA] (VEK50ΔRH2), were designed by replacing each RH with AA, thus eliminating one of the K2hPg binding sites within VEK50, and allowing separate study of each binding site. Using 13C- and 15N-labeled peptides, NMR-derived solution structures of VEK50 in its complex with K2hPg were solved. We conclude that the A-domain of PAM can accommodate two molecules of K2hPg docked within a short distance of each other, and the strength of the binding is slightly different for each site. The solution structure of the VEK50/K2hPg, complex, which is a reductionist model of the PAM/hPg complex, provides insights for the binding mechanism of PAM to a host protein, a process that is critical to S. pyogenes virulence.

AB - VEK50 is a truncated peptide from a Streptococcal pyogenes surface human plasminogen (hPg) binding M-protein (PAM). VEK50 contains the full A-domain of PAM, which is responsible for its low nanomolar binding to hPg. The interaction of VEK50 with kringle 2, the PAM-binding domain in hPg (K2hPg), has been studied by high-resolution NMR spectroscopy. The data show that each VEK50 monomer in solution contains two tight binding sites for K2hPg, one each in the a1- (RH1; R17H18) and a2- (RH2; R30H31) repeats within the A-domain of VEK50. Two mutant forms of VEK50, viz., VEK50[RH1/AA] (VEK50ΔRH1) and VEK50[RH2/AA] (VEK50ΔRH2), were designed by replacing each RH with AA, thus eliminating one of the K2hPg binding sites within VEK50, and allowing separate study of each binding site. Using 13C- and 15N-labeled peptides, NMR-derived solution structures of VEK50 in its complex with K2hPg were solved. We conclude that the A-domain of PAM can accommodate two molecules of K2hPg docked within a short distance of each other, and the strength of the binding is slightly different for each site. The solution structure of the VEK50/K2hPg, complex, which is a reductionist model of the PAM/hPg complex, provides insights for the binding mechanism of PAM to a host protein, a process that is critical to S. pyogenes virulence.

KW - 3-D solution structure

KW - A-repeats

KW - Bacterial receptor

KW - Modular proteins

KW - NMR structures

KW - Peptide mutagenesis

KW - Plasminogen binding

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