Path2Models: Large-scale generation of computational models from biochemical pathway maps

Finja Buchel, Nicolas Rodriguez, Neil Swainston, Clemens Wrzodek, Tobias Czauderna, Roland Keller, Florian Mittag, Michael Schubert, Mihai Glont, Martin Golebiewski, Martijn P van Iersel, Sarah Keating, Matthias Rall, Michael James Wybrow, Henning Hermjakob, Michael Hucka, Douglas B Kell, Wolfgang Muller, Pedro Mendes, Andreas ZellClaudine Chaouiya, Julio Saez-Rodriguez, Falk Schreiber, Camille Laibe, Andreas Drager, Nicolas Le Novere

    Research output: Contribution to journalArticleResearchpeer-review

    78 Citations (Scopus)
    Original languageEnglish
    Pages (from-to)1 - 19
    Number of pages19
    JournalBMC Systems Biology
    Volume7
    DOIs
    Publication statusPublished - 2013

    Cite this

    Buchel, F., Rodriguez, N., Swainston, N., Wrzodek, C., Czauderna, T., Keller, R., ... Le Novere, N. (2013). Path2Models: Large-scale generation of computational models from biochemical pathway maps. BMC Systems Biology, 7, 1 - 19. https://doi.org/10.1186/1752-0509-7-116
    Buchel, Finja ; Rodriguez, Nicolas ; Swainston, Neil ; Wrzodek, Clemens ; Czauderna, Tobias ; Keller, Roland ; Mittag, Florian ; Schubert, Michael ; Glont, Mihai ; Golebiewski, Martin ; van Iersel, Martijn P ; Keating, Sarah ; Rall, Matthias ; Wybrow, Michael James ; Hermjakob, Henning ; Hucka, Michael ; Kell, Douglas B ; Muller, Wolfgang ; Mendes, Pedro ; Zell, Andreas ; Chaouiya, Claudine ; Saez-Rodriguez, Julio ; Schreiber, Falk ; Laibe, Camille ; Drager, Andreas ; Le Novere, Nicolas. / Path2Models: Large-scale generation of computational models from biochemical pathway maps. In: BMC Systems Biology. 2013 ; Vol. 7. pp. 1 - 19.
    @article{f60cefd3d66e401f8d94d1853d1c0def,
    title = "Path2Models: Large-scale generation of computational models from biochemical pathway maps",
    author = "Finja Buchel and Nicolas Rodriguez and Neil Swainston and Clemens Wrzodek and Tobias Czauderna and Roland Keller and Florian Mittag and Michael Schubert and Mihai Glont and Martin Golebiewski and {van Iersel}, {Martijn P} and Sarah Keating and Matthias Rall and Wybrow, {Michael James} and Henning Hermjakob and Michael Hucka and Kell, {Douglas B} and Wolfgang Muller and Pedro Mendes and Andreas Zell and Claudine Chaouiya and Julio Saez-Rodriguez and Falk Schreiber and Camille Laibe and Andreas Drager and {Le Novere}, Nicolas",
    year = "2013",
    doi = "10.1186/1752-0509-7-116",
    language = "English",
    volume = "7",
    pages = "1 -- 19",
    journal = "BMC Systems Biology",
    issn = "1752-0509",
    publisher = "Springer-Verlag London Ltd.",

    }

    Buchel, F, Rodriguez, N, Swainston, N, Wrzodek, C, Czauderna, T, Keller, R, Mittag, F, Schubert, M, Glont, M, Golebiewski, M, van Iersel, MP, Keating, S, Rall, M, Wybrow, MJ, Hermjakob, H, Hucka, M, Kell, DB, Muller, W, Mendes, P, Zell, A, Chaouiya, C, Saez-Rodriguez, J, Schreiber, F, Laibe, C, Drager, A & Le Novere, N 2013, 'Path2Models: Large-scale generation of computational models from biochemical pathway maps', BMC Systems Biology, vol. 7, pp. 1 - 19. https://doi.org/10.1186/1752-0509-7-116

    Path2Models: Large-scale generation of computational models from biochemical pathway maps. / Buchel, Finja; Rodriguez, Nicolas; Swainston, Neil; Wrzodek, Clemens; Czauderna, Tobias; Keller, Roland; Mittag, Florian; Schubert, Michael; Glont, Mihai; Golebiewski, Martin; van Iersel, Martijn P; Keating, Sarah; Rall, Matthias; Wybrow, Michael James; Hermjakob, Henning; Hucka, Michael; Kell, Douglas B; Muller, Wolfgang; Mendes, Pedro; Zell, Andreas; Chaouiya, Claudine; Saez-Rodriguez, Julio; Schreiber, Falk; Laibe, Camille; Drager, Andreas; Le Novere, Nicolas.

    In: BMC Systems Biology, Vol. 7, 2013, p. 1 - 19.

    Research output: Contribution to journalArticleResearchpeer-review

    TY - JOUR

    T1 - Path2Models: Large-scale generation of computational models from biochemical pathway maps

    AU - Buchel, Finja

    AU - Rodriguez, Nicolas

    AU - Swainston, Neil

    AU - Wrzodek, Clemens

    AU - Czauderna, Tobias

    AU - Keller, Roland

    AU - Mittag, Florian

    AU - Schubert, Michael

    AU - Glont, Mihai

    AU - Golebiewski, Martin

    AU - van Iersel, Martijn P

    AU - Keating, Sarah

    AU - Rall, Matthias

    AU - Wybrow, Michael James

    AU - Hermjakob, Henning

    AU - Hucka, Michael

    AU - Kell, Douglas B

    AU - Muller, Wolfgang

    AU - Mendes, Pedro

    AU - Zell, Andreas

    AU - Chaouiya, Claudine

    AU - Saez-Rodriguez, Julio

    AU - Schreiber, Falk

    AU - Laibe, Camille

    AU - Drager, Andreas

    AU - Le Novere, Nicolas

    PY - 2013

    Y1 - 2013

    U2 - 10.1186/1752-0509-7-116

    DO - 10.1186/1752-0509-7-116

    M3 - Article

    VL - 7

    SP - 1

    EP - 19

    JO - BMC Systems Biology

    JF - BMC Systems Biology

    SN - 1752-0509

    ER -