TY - JOUR
T1 - On the combination of molecular replacement and single-wavelength anomalous diffraction phasing for automated structure determination
AU - Panjikar, Santosh
AU - Parthasarathy, Venkataraman
AU - Lamzin, Victor S.
AU - Weiss, Manfred S.
AU - Tucker, Paul A.
PY - 2009
Y1 - 2009
N2 - A combination of molecular replacement and single-wavelength anomalous diffraction phasing has been incorporated into the automated structure-determination platform Auto-Rickshaw. The complete MRSAD procedure includes molecular replacement, model refinement, experimental phasing, phase improvement and automated model building. The improvement over the standard SAD or MR approaches is illustrated by ten test cases taken from the JCSG diffraction data-set database. Poor MR or SAD phases with phase errors larger than 70° can be improved using the described procedure and a large fraction of the model can be determined in a purely automatic manner from X-ray data extending to better than 2.6 Å resolution.
AB - A combination of molecular replacement and single-wavelength anomalous diffraction phasing has been incorporated into the automated structure-determination platform Auto-Rickshaw. The complete MRSAD procedure includes molecular replacement, model refinement, experimental phasing, phase improvement and automated model building. The improvement over the standard SAD or MR approaches is illustrated by ten test cases taken from the JCSG diffraction data-set database. Poor MR or SAD phases with phase errors larger than 70° can be improved using the described procedure and a large fraction of the model can be determined in a purely automatic manner from X-ray data extending to better than 2.6 Å resolution.
KW - Automated structure determination
KW - Molecular replacement
KW - Single-wavelength anomalous diffraction
UR - http://www.scopus.com/inward/record.url?scp=70349602499&partnerID=8YFLogxK
U2 - 10.1107/S0907444909029643
DO - 10.1107/S0907444909029643
M3 - Article
C2 - 19770506
AN - SCOPUS:70349602499
SN - 0907-4449
VL - 65
SP - 1089
EP - 1097
JO - Acta Crystallographica Section D: Biological Crystallography
JF - Acta Crystallographica Section D: Biological Crystallography
IS - 10
ER -