TY - JOUR
T1 - Molecular characterisation of mouse and human TSSC6
T2 - Evidence that TSSC6 is a genuine member of the tetraspanin superfamily and is expressed specifically in haematopoietic organs
AU - Robb, Lorraine
AU - Tarrant, Jacqueline
AU - Groom, Joanna
AU - Ibrahim, Marilyn
AU - Li, Ruili
AU - Borobakas, Bette
AU - Wright, Mark D.
PY - 2001/11/11
Y1 - 2001/11/11
N2 - Previous analyses of the murine and human TSSC6 (also known as Phemx) proteins were not carried out using the full length sequence. Using 5′-RACE and cDNA library screening, we identified an additional 5′ sequence for both the murine Tssc6 cDNA and its human homologue TSSC6. This novel sequence encodes a 5′ exon encoding an in frame, upstream start codon, an N-terminal cytoplasmic domain and a transmembrane domain. The deduced, and now full length, murine and human TSSC6 proteins contained four hydrophobic regions together with other features characteristic of the tetraspanin superfamily. Computational analyses of the full length sequences show that TSSC6 is a genuine, albeit relatively divergent member of this superfamily. Using RNA from a number of mouse tissues, we identified seven splice variants of Tssc6. Splice variants of the human gene were also detected. Tssc6 expression was detected early in embryogenesis in primitive blood cells and was confined to haematopoietic organs in the adult mouse. Tssc6 expression was detected in many haematopoietic cell lines and was highest in cell lines of the erythroid lineage.
AB - Previous analyses of the murine and human TSSC6 (also known as Phemx) proteins were not carried out using the full length sequence. Using 5′-RACE and cDNA library screening, we identified an additional 5′ sequence for both the murine Tssc6 cDNA and its human homologue TSSC6. This novel sequence encodes a 5′ exon encoding an in frame, upstream start codon, an N-terminal cytoplasmic domain and a transmembrane domain. The deduced, and now full length, murine and human TSSC6 proteins contained four hydrophobic regions together with other features characteristic of the tetraspanin superfamily. Computational analyses of the full length sequences show that TSSC6 is a genuine, albeit relatively divergent member of this superfamily. Using RNA from a number of mouse tissues, we identified seven splice variants of Tssc6. Splice variants of the human gene were also detected. Tssc6 expression was detected early in embryogenesis in primitive blood cells and was confined to haematopoietic organs in the adult mouse. Tssc6 expression was detected in many haematopoietic cell lines and was highest in cell lines of the erythroid lineage.
KW - Gene trap
KW - Hematopoiesis
KW - PHEMX
KW - Tetraspanin
KW - Transmembrane 4 superfamily
KW - TSSC6
UR - http://www.scopus.com/inward/record.url?scp=0035846450&partnerID=8YFLogxK
U2 - 10.1016/S0167-4781(01)00306-2
DO - 10.1016/S0167-4781(01)00306-2
M3 - Article
C2 - 11718897
AN - SCOPUS:0035846450
SN - 0167-4781
VL - 1522
SP - 31
EP - 41
JO - Biochimica et Biophysica Acta - Gene Structure and Expression
JF - Biochimica et Biophysica Acta - Gene Structure and Expression
IS - 1
ER -