TY - JOUR
T1 - Membranes under the Magnetic Lens
T2 - A Dive into the Diverse World of Membrane Protein Structures Using Cryo-EM
AU - Piper, Sarah J.
AU - Johnson, Rachel M.
AU - Wootten, Denise
AU - Sexton, Patrick M.
N1 - Funding Information:
Figures were created with UCSF ChimeraX, developed by the Resource for Biocomputing, Visualization, and Informatics at the University of California, San Francisco, with support from National Institutes of Health R01-GM129325 and the Office of Cyber Infrastructure and Computational Biology, National Institute of Allergy and Infectious Diseases. Figures were also rendered using Blender 2.92. Blender is the free and open source 3D creation suite. https://www.blender.org/ . A PDB file of LMNG (Figure 1) was created by Dr Brian Cary. Atomic coordinates and cryo-EM maps, as well as graphs and tables were obtained from public databases RSCB PDB https://www.rcsb.org/ and EMDB https://www.ebi.ac.uk/emdb/ . GPCRdb ( https://gpcrdb.org/ ) was used to analyse the number of GPCR structures that were determined using cryo-EM.
Funding Information:
D.W. is a Senior Research Fellow (grant no: 1155302) and P.M.S. a Senior Principal Research Fellow (grant no: 1154434) of the National Health and Medical Research Council of Australia. P.M.S. is Director of the Australian Research Council Industrial Transformation Training Centre for Cryo-EM of Membrane Proteins (grant no: IC200100052).
Publisher Copyright:
©
PY - 2022/7/18
Y1 - 2022/7/18
N2 - Membrane proteins are highly diverse in both structure and function and can, therefore, present different challenges for structure determination. They are biologically important for cells and organisms as gatekeepers for information and molecule transfer across membranes, but each class of membrane proteins can present unique obstacles to structure determination. Historically, many membrane protein structures have been investigated using highly engineered constructs or using larger fusion proteins to improve solubility and/or increase particle size. Other strategies included the deconstruction of the full-length protein to target smaller soluble domains. These manipulations were often required for crystal formation to support X-ray crystallography or to circumvent lower resolution due to high noise and dynamic motions of protein subdomains. However, recent revolutions in membrane protein biochemistry and cryo-electron microscopy now provide an opportunity to solve high resolution structures of both large, >1 megadalton (MDa), and small, <100 kDa (kDa), drug targets in near-native conditions, routinely reaching resolutions around or below 3 Å. This review provides insights into how the recent advances in membrane biology and biochemistry, as well as technical advances in cryo-electron microscopy, help us to solve structures of a large variety of membrane protein groups, from small receptors to large transporters and more complex machineries.
AB - Membrane proteins are highly diverse in both structure and function and can, therefore, present different challenges for structure determination. They are biologically important for cells and organisms as gatekeepers for information and molecule transfer across membranes, but each class of membrane proteins can present unique obstacles to structure determination. Historically, many membrane protein structures have been investigated using highly engineered constructs or using larger fusion proteins to improve solubility and/or increase particle size. Other strategies included the deconstruction of the full-length protein to target smaller soluble domains. These manipulations were often required for crystal formation to support X-ray crystallography or to circumvent lower resolution due to high noise and dynamic motions of protein subdomains. However, recent revolutions in membrane protein biochemistry and cryo-electron microscopy now provide an opportunity to solve high resolution structures of both large, >1 megadalton (MDa), and small, <100 kDa (kDa), drug targets in near-native conditions, routinely reaching resolutions around or below 3 Å. This review provides insights into how the recent advances in membrane biology and biochemistry, as well as technical advances in cryo-electron microscopy, help us to solve structures of a large variety of membrane protein groups, from small receptors to large transporters and more complex machineries.
UR - http://www.scopus.com/inward/record.url?scp=85135912982&partnerID=8YFLogxK
U2 - 10.1021/acs.chemrev.1c00837
DO - 10.1021/acs.chemrev.1c00837
M3 - Article
C2 - 35849490
AN - SCOPUS:85135912982
SN - 0009-2665
VL - 122
SP - 13989
EP - 14017
JO - Chemical Reviews
JF - Chemical Reviews
IS - 17
ER -