MabsBase: A Mycobacterium abscessus Genome and Annotation Database

Hamed Heydari; Wei Yee Wee; Naline Lokanathan; Ranjeev Hari; Aini Mohamed Yusoff; Ching Yew Beh; Amir Hessam Yazdi; Guat Jah Wong; Yun Fong Ngeow; Siew Woh Choo

doi:10.1371/journal.pone.0062443

MabsBase: A Mycobacterium abscessus Genome and Annotation Database

Hamed Heydari, Wei Yee Wee, Naline Lokanathan, Ranjeev Hari, Aini Mohamed Yusoff, Ching Yew Beh, Amir Hessam Yazdi, Guat Jah Wong, Yun Fong Ngeow, Siew Woh Choo

Research output: Contribution to journal › Article › Research › peer-review

21 Citations (Scopus)

Abstract

Summary:Mycobacterium abscessus is a rapidly growing non-tuberculous mycobacterial species that has been associated with a wide spectrum of human infections. As the classification and biology of this organism is still not well understood, comparative genomic analysis on members of this species may provide further insights on their taxonomy, phylogeny, pathogenicity and other information that may contribute to better management of infections. The MabsBase described in this paper is a user-friendly database providing access to whole-genome sequences of newly discovered M. abscessus strains as well as resources for whole-genome annotations and computational predictions, to support the expanding scientific community interested in M. abscessus research. The MabsBase is freely available at http://mabscessus.um.edu.my.

Original language	English
Article number	e62443
Journal	PLoS ONE
Volume	8
Issue number	4
DOIs	https://doi.org/10.1371/journal.pone.0062443
Publication status	Published - 29 Apr 2013
Externally published	Yes

Access to Document

10.1371/journal.pone.0062443

Link to publication in Scopus

21 Citations
1 Comment / Debate

Correction: MabsBase: A mycobacterium abscessus genome and annotation database (PLoS ONE)
Heydari, H., Wee, W. Y., Lokanathan, N., Hari, R., Yusoff, A. M., Beh, C. Y., Yazdi, A. H., Wong, G. J., Ngeow, Y. F. & Choo, S. W., 2 May 2013, In: PLoS ONE. 8, 5
Research output: Contribution to journal › Comment / Debate › Other › peer-review

Open Access

1 Citation (Scopus)

Cite this

@article{82116affd0bc41fda189fc3b01c779ec,

title = "MabsBase: A Mycobacterium abscessus Genome and Annotation Database",

abstract = "Summary:Mycobacterium abscessus is a rapidly growing non-tuberculous mycobacterial species that has been associated with a wide spectrum of human infections. As the classification and biology of this organism is still not well understood, comparative genomic analysis on members of this species may provide further insights on their taxonomy, phylogeny, pathogenicity and other information that may contribute to better management of infections. The MabsBase described in this paper is a user-friendly database providing access to whole-genome sequences of newly discovered M. abscessus strains as well as resources for whole-genome annotations and computational predictions, to support the expanding scientific community interested in M. abscessus research. The MabsBase is freely available at http://mabscessus.um.edu.my.",

author = "Hamed Heydari and Wee, {Wei Yee} and Naline Lokanathan and Ranjeev Hari and {Mohamed Yusoff}, Aini and Beh, {Ching Yew} and Yazdi, {Amir Hessam} and Wong, {Guat Jah} and Ngeow, {Yun Fong} and Choo, {Siew Woh}",

year = "2013",

month = apr,

day = "29",

doi = "10.1371/journal.pone.0062443",

language = "English",

volume = "8",

journal = "PLoS ONE",

issn = "1932-6203",

publisher = "Public Library of Science",

number = "4",

}

MabsBase : A Mycobacterium abscessus Genome and Annotation Database. / Heydari, Hamed; Wee, Wei Yee; Lokanathan, Naline; Hari, Ranjeev; Mohamed Yusoff, Aini; Beh, Ching Yew; Yazdi, Amir Hessam; Wong, Guat Jah; Ngeow, Yun Fong; Choo, Siew Woh.

In: PLoS ONE, Vol. 8, No. 4, e62443, 29.04.2013.

Research output: Contribution to journal › Article › Research › peer-review

TY - JOUR

T1 - MabsBase

T2 - A Mycobacterium abscessus Genome and Annotation Database

AU - Heydari, Hamed

AU - Wee, Wei Yee

AU - Lokanathan, Naline

AU - Hari, Ranjeev

AU - Mohamed Yusoff, Aini

AU - Beh, Ching Yew

AU - Yazdi, Amir Hessam

AU - Wong, Guat Jah

AU - Ngeow, Yun Fong

AU - Choo, Siew Woh

PY - 2013/4/29

Y1 - 2013/4/29

N2 - Summary:Mycobacterium abscessus is a rapidly growing non-tuberculous mycobacterial species that has been associated with a wide spectrum of human infections. As the classification and biology of this organism is still not well understood, comparative genomic analysis on members of this species may provide further insights on their taxonomy, phylogeny, pathogenicity and other information that may contribute to better management of infections. The MabsBase described in this paper is a user-friendly database providing access to whole-genome sequences of newly discovered M. abscessus strains as well as resources for whole-genome annotations and computational predictions, to support the expanding scientific community interested in M. abscessus research. The MabsBase is freely available at http://mabscessus.um.edu.my.

AB - Summary:Mycobacterium abscessus is a rapidly growing non-tuberculous mycobacterial species that has been associated with a wide spectrum of human infections. As the classification and biology of this organism is still not well understood, comparative genomic analysis on members of this species may provide further insights on their taxonomy, phylogeny, pathogenicity and other information that may contribute to better management of infections. The MabsBase described in this paper is a user-friendly database providing access to whole-genome sequences of newly discovered M. abscessus strains as well as resources for whole-genome annotations and computational predictions, to support the expanding scientific community interested in M. abscessus research. The MabsBase is freely available at http://mabscessus.um.edu.my.

UR - http://www.scopus.com/inward/record.url?scp=84876937038&partnerID=8YFLogxK

U2 - 10.1371/journal.pone.0062443

DO - 10.1371/journal.pone.0062443

M3 - Article

C2 - 23658631

AN - SCOPUS:84876937038

VL - 8

JO - PLoS ONE

JF - PLoS ONE

SN - 1932-6203

IS - 4

M1 - e62443

ER -

MabsBase: A Mycobacterium abscessus Genome and Annotation Database

Abstract

Access to Document

Research output

Correction: MabsBase: A mycobacterium abscessus genome and annotation database (PLoS ONE)

Cite this