INTERFEROME: the database of interferon regulated genes

Samuel Forster, Shamith Samarajiwa, Katie Auchettl, Paul Hertzog

Research output: Contribution to journalArticleResearchpeer-review

154 Citations (Scopus)

Abstract

INTERFEROME is an open access database of types I, II and III Interferon regulated genes (http://www.interferome.org) collected from analysing expression data sets of cells treated with IFNs. This database of interferon regulated genes integrates information from high-throughput experiments with annotation, ontology, orthologue sequences from 37 species, tissue expression patterns and gene regulatory information to enable a detailed investigation of the molecular mechanisms underlying IFN biology. INTERFEROME fulfils a need in infection, immunity, development and cancer research by providing computational tools to assist in identifying interferon signatures in gene lists generated by high-throughput expression technologies, and their potential molecular and biological consequences.
Original languageEnglish
Pages (from-to)D852 - D857
Number of pages6
JournalNucleic Acids Research
Volume37
Issue numberDatabase issue
DOIs
Publication statusPublished - 2009

Cite this

Forster, Samuel ; Samarajiwa, Shamith ; Auchettl, Katie ; Hertzog, Paul. / INTERFEROME: the database of interferon regulated genes. In: Nucleic Acids Research. 2009 ; Vol. 37, No. Database issue. pp. D852 - D857.
@article{90c2cad2cf854319bc761e4a8a3ba66f,
title = "INTERFEROME: the database of interferon regulated genes",
abstract = "INTERFEROME is an open access database of types I, II and III Interferon regulated genes (http://www.interferome.org) collected from analysing expression data sets of cells treated with IFNs. This database of interferon regulated genes integrates information from high-throughput experiments with annotation, ontology, orthologue sequences from 37 species, tissue expression patterns and gene regulatory information to enable a detailed investigation of the molecular mechanisms underlying IFN biology. INTERFEROME fulfils a need in infection, immunity, development and cancer research by providing computational tools to assist in identifying interferon signatures in gene lists generated by high-throughput expression technologies, and their potential molecular and biological consequences.",
author = "Samuel Forster and Shamith Samarajiwa and Katie Auchettl and Paul Hertzog",
year = "2009",
doi = "10.1093/nar/gkn732",
language = "English",
volume = "37",
pages = "D852 -- D857",
journal = "Nucleic Acids Research",
issn = "0305-1048",
publisher = "Oxford University Press",
number = "Database issue",

}

INTERFEROME: the database of interferon regulated genes. / Forster, Samuel; Samarajiwa, Shamith; Auchettl, Katie; Hertzog, Paul.

In: Nucleic Acids Research, Vol. 37, No. Database issue, 2009, p. D852 - D857.

Research output: Contribution to journalArticleResearchpeer-review

TY - JOUR

T1 - INTERFEROME: the database of interferon regulated genes

AU - Forster, Samuel

AU - Samarajiwa, Shamith

AU - Auchettl, Katie

AU - Hertzog, Paul

PY - 2009

Y1 - 2009

N2 - INTERFEROME is an open access database of types I, II and III Interferon regulated genes (http://www.interferome.org) collected from analysing expression data sets of cells treated with IFNs. This database of interferon regulated genes integrates information from high-throughput experiments with annotation, ontology, orthologue sequences from 37 species, tissue expression patterns and gene regulatory information to enable a detailed investigation of the molecular mechanisms underlying IFN biology. INTERFEROME fulfils a need in infection, immunity, development and cancer research by providing computational tools to assist in identifying interferon signatures in gene lists generated by high-throughput expression technologies, and their potential molecular and biological consequences.

AB - INTERFEROME is an open access database of types I, II and III Interferon regulated genes (http://www.interferome.org) collected from analysing expression data sets of cells treated with IFNs. This database of interferon regulated genes integrates information from high-throughput experiments with annotation, ontology, orthologue sequences from 37 species, tissue expression patterns and gene regulatory information to enable a detailed investigation of the molecular mechanisms underlying IFN biology. INTERFEROME fulfils a need in infection, immunity, development and cancer research by providing computational tools to assist in identifying interferon signatures in gene lists generated by high-throughput expression technologies, and their potential molecular and biological consequences.

UR - http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686605/pdf/gkn732.pdf

U2 - 10.1093/nar/gkn732

DO - 10.1093/nar/gkn732

M3 - Article

VL - 37

SP - D852 - D857

JO - Nucleic Acids Research

JF - Nucleic Acids Research

SN - 0305-1048

IS - Database issue

ER -