TY - JOUR
T1 - Identification of hemodynamic biomarkers for bicuspid aortic valve induced aortic dilation using machine learning
AU - Franco, Pamela
AU - Sotelo, Julio
AU - Guala, Andrea
AU - Dux-Santoy, Lydia
AU - Evangelista, Arturo
AU - Rodríguez-Palomares, José
AU - Mery, Domingo
AU - Salas, Rodrigo
AU - Uribe, Sergio
N1 - Funding Information:
This work has been funded by projects PIA-ACT192064, the Millennium Nucleus on Cardiovascular Magnetic Resonance NCN17_129, and ICN2021_004 of the Millennium Science Initiative of the National Agency for Research and Development, ANID. The authors also thanks to Fondecyt project 1181057 also by ANID. Franco P. thanks to ANID – PCHA/Doctorado-Nacional/2018–21180391. Sotelo J. thanks to CONICYT - FONDECYT Postdoctorado 2017 #3170737 and ANID - FONDECYT de Iniciación en Investigación #11200481. Guala A. has received funding from Spanish Ministry of Science, Innovation and Universities ( IJC2018-037349-I ).
Funding Information:
Millennium Science Initiative of the Ministry of Economy, Development and Tourism , grant Nucleus for Cardiovascular Magnetic Resonance and ICN2021_004 . We are also grateful to Biomedical Imaging Center at Pontificia Universidad Católica de Chile and Hospital Universitari Vall d'Hebron for support this research.
Funding Information:
This work has been funded by projects PIA-ACT192064, the Millennium Nucleus on Cardiovascular Magnetic Resonance NCN17_129, and ICN2021_004 of the Millennium Science Initiative of the National Agency for Research and Development, ANID. The authors also thanks to Fondecyt project 1181057 also by ANID. Franco P. thanks to ANID ? PCHA/Doctorado-Nacional/2018?21180391. Sotelo J. thanks to CONICYT - FONDECYT Postdoctorado 2017 #3170737 and ANID - FONDECYT de Iniciaci?n en Investigaci?n #11200481. Guala A. has received funding from Spanish Ministry of Science, Innovation and Universities (IJC2018-037349-I).Millennium Science Initiative of the Ministry of Economy, Development and Tourism, grant Nucleus for Cardiovascular Magnetic Resonance and ICN2021_004. We are also grateful to Biomedical Imaging Center at Pontificia Universidad Cat?lica de Chile and Hospital Universitari Vall d'Hebron for support this research.
Publisher Copyright:
© 2021 Elsevier Ltd
PY - 2022/2
Y1 - 2022/2
N2 - Recent advances in medical imaging have confirmed the presence of altered hemodynamics in bicuspid aortic valve (BAV) patients. Therefore, there is a need for new hemodynamic biomarkers to refine disease monitoring and improve patient risk stratification. This research aims to analyze and extract multiple correlation patterns of hemodynamic parameters from 4D Flow MRI data and find which parameters allow an accurate classification between healthy volunteers (HV) and BAV patients with dilated and non-dilated ascending aorta using machine learning. Sixteen hemodynamic parameters were calculated in the ascending aorta (AAo) and aortic arch (AArch) at peak systole from 4D Flow MRI. We used sequential forward selection (SFS) and principal component analysis (PCA) as feature selection algorithms. Then, eleven machine-learning classifiers were implemented to separate HV and BAV patients (non- and dilated ascending aorta). Multiple correlation patterns from hemodynamic parameters were extracted using hierarchical clustering. The linear discriminant analysis and random forest are the best performing classifiers, using five hemodynamic parameters selected with SFS (velocity angle, forward velocity, vorticity, and backward velocity in AAo; and helicity density in AArch) a 96.31 ± 1.76% and 96.00 ± 0.83% accuracy, respectively. Hierarchical clustering revealed three groups of correlated features. According to this analysis, we observed that features selected by SFS have a better performance than those selected by PCA because the five selected parameters were distributed according to 3 different clusters. Based on the proposed method, we concluded that the feature selection method found five potentially hemodynamic biomarkers related to this disease.
AB - Recent advances in medical imaging have confirmed the presence of altered hemodynamics in bicuspid aortic valve (BAV) patients. Therefore, there is a need for new hemodynamic biomarkers to refine disease monitoring and improve patient risk stratification. This research aims to analyze and extract multiple correlation patterns of hemodynamic parameters from 4D Flow MRI data and find which parameters allow an accurate classification between healthy volunteers (HV) and BAV patients with dilated and non-dilated ascending aorta using machine learning. Sixteen hemodynamic parameters were calculated in the ascending aorta (AAo) and aortic arch (AArch) at peak systole from 4D Flow MRI. We used sequential forward selection (SFS) and principal component analysis (PCA) as feature selection algorithms. Then, eleven machine-learning classifiers were implemented to separate HV and BAV patients (non- and dilated ascending aorta). Multiple correlation patterns from hemodynamic parameters were extracted using hierarchical clustering. The linear discriminant analysis and random forest are the best performing classifiers, using five hemodynamic parameters selected with SFS (velocity angle, forward velocity, vorticity, and backward velocity in AAo; and helicity density in AArch) a 96.31 ± 1.76% and 96.00 ± 0.83% accuracy, respectively. Hierarchical clustering revealed three groups of correlated features. According to this analysis, we observed that features selected by SFS have a better performance than those selected by PCA because the five selected parameters were distributed according to 3 different clusters. Based on the proposed method, we concluded that the feature selection method found five potentially hemodynamic biomarkers related to this disease.
KW - Bicuspid aortic valve
KW - Feature selection
KW - Hemodynamic biomarker
KW - Machine learning
KW - Pattern recognition
UR - http://www.scopus.com/inward/record.url?scp=85121277315&partnerID=8YFLogxK
U2 - 10.1016/j.compbiomed.2021.105147
DO - 10.1016/j.compbiomed.2021.105147
M3 - Article
C2 - 34929463
AN - SCOPUS:85121277315
SN - 0010-4825
VL - 141
JO - Computers in Biology and Medicine
JF - Computers in Biology and Medicine
M1 - 105147
ER -