Femtosecond free-electron laser x-ray diffraction data sets for algorithm development

Stephan Kassemeyer; Jan Steinbrener; Lukas Lomb; Elisabeth Hartmann; Andrew L Aquila; Anton Barty; Andrew V Martin; Christina Y Hampton; Sasa Bajt; Miriam Barthelmess; Thomas R M Barends; Christoph Bostedt; Mario Bott; John D Bozek; Nicola Coppola; Max J Cryle; Daniel P DePonte; R Bruce Doak; Sascha W Epp; Benjamin Erk; Holger Fleckenstein; Lutz Foucar; Heinz Graafsma; Lars Gumprecht; Andreas Hartmann; Robert Hartmann; Gunter Hauser; Helmut Hirsemann; Andre Homke; Peter Holl; Olof Jonsson; Nils Kimmel; Faton Krasniqi; Mengning Liang; Filipe R N C Maia; Stefano Marchesini; Karol Nass; Christian Reich; Daniel Rolles; Benedikt Rudek; Artem Rudenko; Carlo Schmidt; Joachim Schulz; Robert L Shoeman; Raymond G Sierra; Heike Soltau; John C H Spence; Dmitri Starodub; Francesco Stellato; Stephan Stern; Gunter Stier; Martin Svenda; Georg Weidenspointner; Uwe Weierstall; Thomas A White; Cornelia Wunderer; Matthias Frank; Henry N Chapman; Joachim Ullrich; Lothar Struder; Michael J Bogan; Ilme Schlichting

doi:10.1364/OE.20.004149

Femtosecond free-electron laser x-ray diffraction data sets for algorithm development

Stephan Kassemeyer, Jan Steinbrener, Lukas Lomb, Elisabeth Hartmann, Andrew L Aquila, Anton Barty, Andrew V Martin, Christina Y Hampton, Sasa Bajt, Miriam Barthelmess, Thomas R M Barends, Christoph Bostedt, Mario Bott, John D Bozek, Nicola Coppola, Max J Cryle, Daniel P DePonte, R Bruce Doak, Sascha W Epp, Benjamin ErkHolger Fleckenstein, Lutz Foucar, Heinz Graafsma, Lars Gumprecht, Andreas Hartmann, Robert Hartmann, Gunter Hauser, Helmut Hirsemann, Andre Homke, Peter Holl, Olof Jonsson, Nils Kimmel, Faton Krasniqi, Mengning Liang, Filipe R N C Maia, Stefano Marchesini, Karol Nass, Christian Reich, Daniel Rolles, Benedikt Rudek, Artem Rudenko, Carlo Schmidt, Joachim Schulz, Robert L Shoeman, Raymond G Sierra, Heike Soltau, John C H Spence, Dmitri Starodub, Francesco Stellato, Stephan Stern, Gunter Stier, Martin Svenda, Georg Weidenspointner, Uwe Weierstall, Thomas A White, Cornelia Wunderer, Matthias Frank, Henry N Chapman, Joachim Ullrich, Lothar Struder, Michael J Bogan, Ilme Schlichting

Research output: Contribution to journal › Article › Research › peer-review

59 Citations (Scopus)

Abstract

We describe femtosecond X-ray diffraction data sets of viruses and nanoparticles collected at the Linac Coherent Light Source. The data establish the first large benchmark data sets for coherent diffraction methods freely available to the public, to bolster the development of algorithms that are essential for developing this novel approach as a useful imaging technique. Applications are 2D reconstructions, orientation classification and finally 3D imaging by assembling 2D patterns into a 3D diffraction volume.

Original language	English
Pages (from-to)	4149 - 4158
Number of pages	10
Journal	Optics Express
Volume	20
Issue number	4
DOIs	https://doi.org/10.1364/OE.20.004149
Publication status	Published - 2012
Externally published	Yes

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10.1364/OE.20.004149

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Kassemeyer, S., Steinbrener, J., Lomb, L., Hartmann, E., Aquila, A. L., Barty, A., Martin, A. V., Hampton, C. Y., Bajt, S., Barthelmess, M., Barends, T. R. M., Bostedt, C., Bott, M., Bozek, J. D., Coppola, N., Cryle, M. J., DePonte, D. P., Doak, R. B., Epp, S. W., ... Schlichting, I. (2012). Femtosecond free-electron laser x-ray diffraction data sets for algorithm development. Optics Express, 20(4), 4149 - 4158. https://doi.org/10.1364/OE.20.004149

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title = "Femtosecond free-electron laser x-ray diffraction data sets for algorithm development",

abstract = "We describe femtosecond X-ray diffraction data sets of viruses and nanoparticles collected at the Linac Coherent Light Source. The data establish the first large benchmark data sets for coherent diffraction methods freely available to the public, to bolster the development of algorithms that are essential for developing this novel approach as a useful imaging technique. Applications are 2D reconstructions, orientation classification and finally 3D imaging by assembling 2D patterns into a 3D diffraction volume.",

author = "Stephan Kassemeyer and Jan Steinbrener and Lukas Lomb and Elisabeth Hartmann and Aquila, {Andrew L} and Anton Barty and Martin, {Andrew V} and Hampton, {Christina Y} and Sasa Bajt and Miriam Barthelmess and Barends, {Thomas R M} and Christoph Bostedt and Mario Bott and Bozek, {John D} and Nicola Coppola and Cryle, {Max J} and DePonte, {Daniel P} and Doak, {R Bruce} and Epp, {Sascha W} and Benjamin Erk and Holger Fleckenstein and Lutz Foucar and Heinz Graafsma and Lars Gumprecht and Andreas Hartmann and Robert Hartmann and Gunter Hauser and Helmut Hirsemann and Andre Homke and Peter Holl and Olof Jonsson and Nils Kimmel and Faton Krasniqi and Mengning Liang and Maia, {Filipe R N C} and Stefano Marchesini and Karol Nass and Christian Reich and Daniel Rolles and Benedikt Rudek and Artem Rudenko and Carlo Schmidt and Joachim Schulz and Shoeman, {Robert L} and Sierra, {Raymond G} and Heike Soltau and Spence, {John C H} and Dmitri Starodub and Francesco Stellato and Stephan Stern and Gunter Stier and Martin Svenda and Georg Weidenspointner and Uwe Weierstall and White, {Thomas A} and Cornelia Wunderer and Matthias Frank and Chapman, {Henry N} and Joachim Ullrich and Lothar Struder and Bogan, {Michael J} and Ilme Schlichting",

year = "2012",

doi = "10.1364/OE.20.004149",

language = "English",

volume = "20",

pages = "4149 -- 4158",

journal = "Optics Express",

issn = "1094-4087",

publisher = "Optical Society of America (OSA)",

number = "4",

}

Kassemeyer, S, Steinbrener, J, Lomb, L, Hartmann, E, Aquila, AL, Barty, A, Martin, AV, Hampton, CY, Bajt, S, Barthelmess, M, Barends, TRM, Bostedt, C, Bott, M, Bozek, JD, Coppola, N, Cryle, MJ, DePonte, DP, Doak, RB, Epp, SW, Erk, B, Fleckenstein, H, Foucar, L, Graafsma, H, Gumprecht, L, Hartmann, A, Hartmann, R, Hauser, G, Hirsemann, H, Homke, A, Holl, P, Jonsson, O, Kimmel, N, Krasniqi, F, Liang, M, Maia, FRNC, Marchesini, S, Nass, K, Reich, C, Rolles, D, Rudek, B, Rudenko, A, Schmidt, C, Schulz, J, Shoeman, RL, Sierra, RG, Soltau, H, Spence, JCH, Starodub, D, Stellato, F, Stern, S, Stier, G, Svenda, M, Weidenspointner, G, Weierstall, U, White, TA, Wunderer, C, Frank, M, Chapman, HN, Ullrich, J, Struder, L, Bogan, MJ & Schlichting, I 2012, 'Femtosecond free-electron laser x-ray diffraction data sets for algorithm development', Optics Express, vol. 20, no. 4, pp. 4149 - 4158. https://doi.org/10.1364/OE.20.004149

TY - JOUR

T1 - Femtosecond free-electron laser x-ray diffraction data sets for algorithm development

AU - Kassemeyer, Stephan

AU - Steinbrener, Jan

AU - Lomb, Lukas

AU - Hartmann, Elisabeth

AU - Aquila, Andrew L

AU - Barty, Anton

AU - Martin, Andrew V

AU - Hampton, Christina Y

AU - Bajt, Sasa

AU - Barthelmess, Miriam

AU - Barends, Thomas R M

AU - Bostedt, Christoph

AU - Bott, Mario

AU - Bozek, John D

AU - Coppola, Nicola

AU - Cryle, Max J

AU - DePonte, Daniel P

AU - Doak, R Bruce

AU - Epp, Sascha W

AU - Erk, Benjamin

AU - Fleckenstein, Holger

AU - Foucar, Lutz

AU - Graafsma, Heinz

AU - Gumprecht, Lars

AU - Hartmann, Andreas

AU - Hartmann, Robert

AU - Hauser, Gunter

AU - Hirsemann, Helmut

AU - Homke, Andre

AU - Holl, Peter

AU - Jonsson, Olof

AU - Kimmel, Nils

AU - Krasniqi, Faton

AU - Liang, Mengning

AU - Maia, Filipe R N C

AU - Marchesini, Stefano

AU - Nass, Karol

AU - Reich, Christian

AU - Rolles, Daniel

AU - Rudek, Benedikt

AU - Rudenko, Artem

AU - Schmidt, Carlo

AU - Schulz, Joachim

AU - Shoeman, Robert L

AU - Sierra, Raymond G

AU - Soltau, Heike

AU - Spence, John C H

AU - Starodub, Dmitri

AU - Stellato, Francesco

AU - Stern, Stephan

AU - Stier, Gunter

AU - Svenda, Martin

AU - Weidenspointner, Georg

AU - Weierstall, Uwe

AU - White, Thomas A

AU - Wunderer, Cornelia

AU - Frank, Matthias

AU - Chapman, Henry N

AU - Ullrich, Joachim

AU - Struder, Lothar

AU - Bogan, Michael J

AU - Schlichting, Ilme

PY - 2012

Y1 - 2012

N2 - We describe femtosecond X-ray diffraction data sets of viruses and nanoparticles collected at the Linac Coherent Light Source. The data establish the first large benchmark data sets for coherent diffraction methods freely available to the public, to bolster the development of algorithms that are essential for developing this novel approach as a useful imaging technique. Applications are 2D reconstructions, orientation classification and finally 3D imaging by assembling 2D patterns into a 3D diffraction volume.

AB - We describe femtosecond X-ray diffraction data sets of viruses and nanoparticles collected at the Linac Coherent Light Source. The data establish the first large benchmark data sets for coherent diffraction methods freely available to the public, to bolster the development of algorithms that are essential for developing this novel approach as a useful imaging technique. Applications are 2D reconstructions, orientation classification and finally 3D imaging by assembling 2D patterns into a 3D diffraction volume.

UR - http://www.ncbi.nlm.nih.gov/pubmed/22418172

U2 - 10.1364/OE.20.004149

DO - 10.1364/OE.20.004149

M3 - Article

SN - 1094-4087

VL - 20

SP - 4149

EP - 4158

JO - Optics Express

JF - Optics Express

IS - 4

ER -

Femtosecond free-electron laser x-ray diffraction data sets for algorithm development

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