TY - JOUR
T1 - Complete genome sequence of Corynebacterium pseudotuberculosis biovar ovis strain P54B96 isolated from antelope in South Africa obtained by rapid next generation sequencing technology
AU - Hassan, Syed Shah
AU - Guimarães, Luis Carlos
AU - Pereira, Ulisses de Pádua
AU - Islam, Arshad
AU - Ali, Amjad
AU - Bakhtiar, Syeda Marriam
AU - Ribeiro, Dayana
AU - dos Santos, Anderson Rodrigues
AU - Soares, Siomar de Castro
AU - Dorella, Fernanda
AU - Pinto, Anne Cybelle
AU - Schneider, Maria Paula Cruz
AU - Barbosa, Maria Silvanira
AU - Almeida, Síntia
AU - Abreu, Vinícius
AU - Aburjaile, Flávia
AU - Carneiro, Adriana Ribeiro
AU - Cerdeira, Louise Teixeira
AU - Fiaux, Karina
AU - Barbosa, Eudes
AU - Diniz, Carlos
AU - Rocha, Flavia S.
AU - Ramos, Rommel Thiago Jucá
AU - Jain, Neha
AU - Tiwari, Sandeep
AU - Barh, Debmalya
AU - Miyoshi, Anderson
AU - Müller, Borna
AU - Silva, Artur
AU - Azevedo, Vasco
PY - 2012/12/1
Y1 - 2012/12/1
N2 - The Actinobacteria, Corynebacterium pseudotuberculosis strain P54B96, a nonmotile, non-sporulating and a mesophile bacterium, was isolated from liver, lung and mediastinal lymph node lesions in an antelope from South Africa. This strain is interesting in the sense that it has been found together with non-tuberculous mycobacteria (NTMs) which could nevertheless play a role in the lesion formation. In this work, we describe a set of features of C. pseudotuberculosis P54B96, together with the details of the complete genome sequence and annotation. The genome comprises of 2.34 Mbp long, single circular genome with 2,084 protein-coding genes, 12 rRNA, 49 tRNA and 62 pseudogenes and a G+C content of 52.19%. The analysis of the genome se-quence provides means to better understanding the molecular and genetic basis of virulence of this bacterium, enabling a detailed investigation of its pathogenesis.
AB - The Actinobacteria, Corynebacterium pseudotuberculosis strain P54B96, a nonmotile, non-sporulating and a mesophile bacterium, was isolated from liver, lung and mediastinal lymph node lesions in an antelope from South Africa. This strain is interesting in the sense that it has been found together with non-tuberculous mycobacteria (NTMs) which could nevertheless play a role in the lesion formation. In this work, we describe a set of features of C. pseudotuberculosis P54B96, together with the details of the complete genome sequence and annotation. The genome comprises of 2.34 Mbp long, single circular genome with 2,084 protein-coding genes, 12 rRNA, 49 tRNA and 62 pseudogenes and a G+C content of 52.19%. The analysis of the genome se-quence provides means to better understanding the molecular and genetic basis of virulence of this bacterium, enabling a detailed investigation of its pathogenesis.
KW - Antelope
KW - Biovar ovis
KW - Caseous lymphadenitis/cheesy gland disease
KW - Genome sequencing
KW - Gram-positive pathogen
KW - Ion Torrent
KW - Liver lesion
UR - http://www.scopus.com/inward/record.url?scp=84872042186&partnerID=8YFLogxK
U2 - 10.4056/sigs.3066455
DO - 10.4056/sigs.3066455
M3 - Article
AN - SCOPUS:84872042186
VL - 7
SP - 189
EP - 199
JO - Standards in Genomic Sciences
JF - Standards in Genomic Sciences
SN - 1944-3277
IS - 2
ER -