TY - JOUR
T1 - COMPARE, a multi-organism system for cross-species data comparison and transfer of information
AU - Salgado, David
AU - Gimenez, Gregory
AU - Coulier, Francois
AU - Marcelle, Christophe
PY - 2008
Y1 - 2008
N2 - (APPLICATIONS NOTE) MOTIVATION: COMPARE is a multi-organism web-based resource system designed to easily retrieve, correlate and interpret data across species. The COMPARE interface provides access to a wide array of information including genomic structure, expression data, annotations, pathways and literature links for human and three widely studied animal models (zebrafish, Drosophila and mouse). A consensus ortholog-finding pipeline combining several ortholog prediction methods allows accurate comparisons of data across species and has been utilized to transfer information from well studied organisms to more poorly annotated ones. AVAILABILITY: http://compare.ibdml.univ-mrs.fr.
AB - (APPLICATIONS NOTE) MOTIVATION: COMPARE is a multi-organism web-based resource system designed to easily retrieve, correlate and interpret data across species. The COMPARE interface provides access to a wide array of information including genomic structure, expression data, annotations, pathways and literature links for human and three widely studied animal models (zebrafish, Drosophila and mouse). A consensus ortholog-finding pipeline combining several ortholog prediction methods allows accurate comparisons of data across species and has been utilized to transfer information from well studied organisms to more poorly annotated ones. AVAILABILITY: http://compare.ibdml.univ-mrs.fr.
UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=18056065
M3 - Letter
SN - 1367-4803
VL - 24
SP - 447
EP - 449
JO - Bioinformatics
JF - Bioinformatics
IS - 3
ER -