Automatic generation of protein structure cartoons with Pro-origami

Alex Stivala, Michael Wybrow, Anthony Wirth, James Whisstock, Peter Stuckey

Research output: Contribution to journalArticleResearchpeer-review

101 Citations (Scopus)

Abstract

Summary: Protein topology diagrams are two dimensional representations of protein structure that are particularly useful in understanding and analysing complex protein folds. Generating such diagrams presents a major problem in graph drawing, with automatic approaches often resulting in errors or uninterpretable results. Here we apply a breakthrough in diagram layout to protein topology cartoons, providing clear, accurate, interactive and editable diagrams, which are also an interface to a structural search method.
Original languageEnglish
Pages (from-to)3315 - 3316
Number of pages2
JournalBioinformatics
Volume27
Issue number23
DOIs
Publication statusPublished - 2011

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