TY - JOUR
T1 - A markov-switching model approach to heart sound segmentation and classification
AU - Noman, Fuad
AU - Salleh, Sh Hussain
AU - Ting, Chee Ming
AU - Samdin, S. Balqis
AU - Ombao, Hernando
AU - Hussain, Hadri
N1 - Funding Information:
Manuscript received September 10, 2018; revised April 10, 2019 and May 22, 2019; accepted June 19, 2019. Date of publication June 26, 2019; date of current version March 6, 2020. This work was supported in part by the Universiti Teknologi Malaysia and the Ministry of Higher Education, Malaysia, under Grants Q.J130000.2545.19H3, R.J130000.7845.4L840, R.J130000.7809.4L841, and R.J130000.7831. 4L845, and in part by the King Abdullah University of Science and Technology under Baseline Research Fund. (Corresponding author: Fuad Noman.) F. Noman, S.-H. Salleh, and H. Hussain are with the School of Biomedical Engineering and Health Sciences, Universiti Teknologi Malaysia, Skudai 81310, Malaysia (e-mail:, [email protected]; hussain@fke. utm.my; [email protected]).
Publisher Copyright:
© 2013 IEEE.
Copyright:
Copyright 2020 Elsevier B.V., All rights reserved.
PY - 2020/3
Y1 - 2020/3
N2 - Objective: We consider challenges in accurate segmentation of heart sound signals recorded under noisy clinical environments for subsequent classification of pathological events. Existing state-of-the-art solutions to heart sound segmentation use probabilistic models such as hidden Markov models (HMMs), which, however, are limited by its observation independence assumption and rely on pre-extraction of noise-robust features. Methods: We propose a Markov-switching autoregressive (MSAR) process to model the raw heart sound signals directly, which allows efficient segmentation of the cyclical heart sound states according to the distinct dependence structure in each state. To enhance robustness, we extend the MSAR model to a switching linear dynamic system (SLDS) that jointly model both the switching AR dynamics of underlying heart sound signals and the noise effects. We introduce a novel algorithm via fusion of switching Kalman filter and the duration-dependent Viterbi algorithm, which incorporates the duration of heart sound states to improve state decoding. Results: Evaluated on Physionet/CinC Challenge 2016 dataset, the proposed MSAR-SLDS approach significantly outperforms the hidden semi-Markov model (HSMM) in heart sound segmentation based on raw signals and comparable to a feature-based HSMM. The segmented labels were then used to train Gaussian-mixture HMM classifier for identification of abnormal beats, achieving high average precision of 86.1% on the same dataset including very noisy recordings. Conclusion: The proposed approach shows noticeable performance in heart sound segmentation and classification on a large noisy dataset. Significance: It is potentially useful in developing automated heart monitoring systems for pre-screening of heart pathologies.
AB - Objective: We consider challenges in accurate segmentation of heart sound signals recorded under noisy clinical environments for subsequent classification of pathological events. Existing state-of-the-art solutions to heart sound segmentation use probabilistic models such as hidden Markov models (HMMs), which, however, are limited by its observation independence assumption and rely on pre-extraction of noise-robust features. Methods: We propose a Markov-switching autoregressive (MSAR) process to model the raw heart sound signals directly, which allows efficient segmentation of the cyclical heart sound states according to the distinct dependence structure in each state. To enhance robustness, we extend the MSAR model to a switching linear dynamic system (SLDS) that jointly model both the switching AR dynamics of underlying heart sound signals and the noise effects. We introduce a novel algorithm via fusion of switching Kalman filter and the duration-dependent Viterbi algorithm, which incorporates the duration of heart sound states to improve state decoding. Results: Evaluated on Physionet/CinC Challenge 2016 dataset, the proposed MSAR-SLDS approach significantly outperforms the hidden semi-Markov model (HSMM) in heart sound segmentation based on raw signals and comparable to a feature-based HSMM. The segmented labels were then used to train Gaussian-mixture HMM classifier for identification of abnormal beats, achieving high average precision of 86.1% on the same dataset including very noisy recordings. Conclusion: The proposed approach shows noticeable performance in heart sound segmentation and classification on a large noisy dataset. Significance: It is potentially useful in developing automated heart monitoring systems for pre-screening of heart pathologies.
KW - autoregressive models
KW - Dynamic clustering
KW - regime-switching models
KW - state-space models
KW - Viterbi algorithm
UR - http://www.scopus.com/inward/record.url?scp=85081941952&partnerID=8YFLogxK
U2 - 10.1109/JBHI.2019.2925036
DO - 10.1109/JBHI.2019.2925036
M3 - Article
C2 - 31251203
AN - SCOPUS:85081941952
SN - 2168-2194
VL - 24
SP - 705
EP - 716
JO - IEEE Journal of Biomedical and Health Informatics
JF - IEEE Journal of Biomedical and Health Informatics
IS - 3
ER -