To apply genomic approaches to investigate microbial populations and their interactions with human hosts

Holt, Kathryn (Primary Chief Investigator (PCI))

Infectious Diseases

Project: Research

Status	Finished
Effective start/end date	16/01/19 → 31/12/22

13 Article

Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae
Foster-Nyarko, E., Cottingham, H., Wick, R. R., Judd, L. M., Lam, M. M. C., Wyres, K. L., Stanton, T. D., Tsang, K. K., David, S., Aanensen, D. M., Brisse, S. & Holt, K. E., 2023, In: Microbial Genomics. 9, 2, 16 p., 000936.
Research output: Contribution to journal › Article › Research › peer-review

Open Access

13 Citations (Scopus)
A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality
Hawkey, J., Vezina, B., Monk, J. M., Judd, L. M., Harshegyi, T., López-Fernández, S., Rodrigues, C., Brisse, S., Holt, K. E. & Wyres, K. L., May 2022, In: Genome Research. 32, 5, p. 1004-1014 11 p.
Research output: Contribution to journal › Article › Research › peer-review

Open Access

8 Citations (Scopus)
Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia
Stewart, J., Judd, L. M., Jenney, A., Holt, K. E., Wyres, K. L. & Hawkey, J., 24 Aug 2022, In: BMC Infectious Diseases. 22, 1, 10 p., 704.
Research output: Contribution to journal › Article › Research › peer-review

Open Access

12 Citations (Scopus)