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Personal profile

Research area keywords

  • Genome-Scale Metabolic Modelling
  • Virtual Cell Modelling
  • Systems Pharmacology
  • Polymyxin

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 2009 2019

  • 35 Article
  • 3 Review Article
  • 1 Conference Paper
  • 1 Comment / Debate

Comparative metabolomics and transcriptomics reveal multiple pathways associated with polymyxin killing in pseudomonas aeruginosa

Han, M-L., Zhu, Y., Creek, D. J., Lin, Y-W., Gutu, A. D., Hertzog, P., Purcell, T., Shen, H-H., Moskowitz, S. M., Velkov, T. & Li, J., 1 Jan 2019, In : mSystems. 4, 1, 18 p., e00149-18.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

iLearn: an integrated platform and meta-learner for feature engineering, machine-learning analysis and modeling of DNA, RNA and protein sequence data

Chen, Z., Zhao, P., Li, F., Marquez-Lago, T. T., Leier, A., Revote, J., Zhu, Y., Powell, D. R., Akutsu, T., Webb, G. I., Chou, K-C., Smith, A. I., Daly, R. J., Li, J. & Song, J., 24 Apr 2019, (Accepted/In press) In : Briefings in Bioinformatics. 11 p., bbz041.

Research output: Contribution to journalArticleResearchpeer-review

Novel polymyxin combination with the antiretroviral zidovudine exerts synergistic killing against Ndm-producing multidrug-resistant klebsiella pneumoniae

Lin, Y-W., Rahim, N. A., Zhao, J., Han, M-L., Yu, H. H., Wickremasinghe, H., Chen, K., Wang, J., Paterson, D. L., Zhu, Y., Rao, G. G., Zhou, Q. T., Forrest, A., Velkov, T. & Li, J., 1 Apr 2019, In : Antimicrobial Agents and Chemotherapy. 63, 4, 11 p., e02176-18.

Research output: Contribution to journalArticleResearchpeer-review

PRISMOID: a comprehensive 3D structure database for post-translational modifications and mutations with functional impact

Li, F., Fan, C., Marquez-Lago, T. T., Leier, A., Revote, J., Jia, C., Zhu, Y., Smith, A. I., Webb, G. I., Liu, Q., Wei, L., Li, J. & Song, J., 4 Jun 2019, (Accepted/In press) In : Briefings in Bioinformatics. 11 p., bbz050.

Research output: Contribution to journalArticleResearchpeer-review

Synergistic Combination of Polymyxin B and Enrofloxacin Induced Metabolic Perturbations in Extensive Drug-resistant Pseudomonas aeruginosa

Lin, Y-W., Han, M-L., Zhao, J., Zhu, Y., Rao, G., Forrest, A., Song, J., Kaye, K. S., Hertzog, P., Purcell, A., Creek, D., Zhou, T. Q., Velkov, T. & Li, J., 3 Oct 2019, In : Frontiers in Pharmacology. 10, 11 p., 1146.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Activities 2014 2017

13th Annual Conference of the Metabolomics Society (Metabolomics 2017)

Yan Zhu (Speaker)
2017

Activity: Participating in or organising an event typesContribution to conference

Virtual cell modelling of Pseudomonas aeruginosa PAO1

Yan Zhu (Speaker)
2017

Activity: Participating in or organising an event typesContribution to workshop, seminar, course

International Journal of Antimicrobial Agents (Journal)

Yan Zhu (Peer reviewer)
2017

Activity: Publication peer-review and editorial work typesPeer review responsibility

Biochimica et Biophysica Acta - Biomembranes (Journal)

Yan Zhu (Peer reviewer)
2017

Activity: Publication peer-review and editorial work typesPeer review responsibility

Universitat Konstanz (University of Constance)

Yan Zhu (Visiting researcher)
2017

Activity: Visiting an external institution typesVisiting an external academic institution