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Personal profile

Research area keywords

  • Genome-Scale Metabolic Modelling
  • Virtual Cell Modelling
  • Systems Pharmacology
  • Polymyxin

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 2009 2019

  • 39 Article
  • 3 Review Article
  • 1 Conference Paper
  • 1 Comment / Debate
2 Citations (Scopus)

Comparative metabolomics and transcriptomics reveal multiple pathways associated with polymyxin killing in pseudomonas aeruginosa

Han, M-L., Zhu, Y., Creek, D. J., Lin, Y-W., Gutu, A. D., Hertzog, P., Purcell, T., Shen, H-H., Moskowitz, S. M., Velkov, T. & Li, J., 1 Jan 2019, In : mSystems. 4, 1, 18 p., e00149-18.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Comparative metabolomics reveals key pathways associated with the synergistic killing of colistin and sulbactam combination against multidrug-resistant Acinetobacter baumannii

Han, M-L., Liu, X., Velkov, T., Lin, Y-W., Zhu, Y., Creek, D. J., Barlow, C. K., Yu, H. H., Zhou, Z., Zhang, J. & Li, J., 4 Jul 2019, In : Frontiers in Pharmacology. 10, 11 p., 754.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

iLearn: an integrated platform and meta-learner for feature engineering, machine-learning analysis and modeling of DNA, RNA and protein sequence data

Chen, Z., Zhao, P., Li, F., Marquez-Lago, T. T., Leier, A., Revote, J., Zhu, Y., Powell, D. R., Akutsu, T., Webb, G. I., Chou, K-C., Smith, A. I., Daly, R. J., Li, J. & Song, J., 24 Apr 2019, (Accepted/In press) In : Briefings in Bioinformatics. 11 p., bbz041.

Research output: Contribution to journalArticleResearchpeer-review

Metabolomics study of the synergistic killing of polymyxin B in combination with amikacin against polymyxin-susceptible and resistant Pseudomonas aeruginosa

Hussein, M., Han, M-L., Zhu, Y., Zhou, Q. T., Lin, Y-W., Hancock, R. E. W., Hoyer, D., Creek, D. J., Li, J. & Velkov, T., 24 Sep 2019, (Accepted/In press) In : Antimicrobial Agents and Chemotherapy.

Research output: Contribution to journalArticleResearchpeer-review

Multifaceted mechanisms of colistin resistance revealed by genomic analysis of multidrug-resistant Klebsiella pneumoniae isolates from individual patients before and after colistin treatment

Zhu, Y., Galani, I., Karaiskos, I., Lu, J., Aye, S. M., Huang, J., Yu, H. H., Velkov, T., Giamarellou, H. & Li, J., 1 Oct 2019, In : Journal of Infection. 79, 4, p. 312-321 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Activities 2014 2017

Biochimica et Biophysica Acta - Biomembranes (Journal)

Yan Zhu (Peer reviewer)
2017

Activity: Publication peer-review and editorial work typesPeer review responsibility

Universitat Konstanz (University of Constance)

Yan Zhu (Visiting researcher)
2017

Activity: Visiting an external institution typesVisiting an external academic institution

International Journal of Antimicrobial Agents (Journal)

Yan Zhu (Peer reviewer)
2017

Activity: Publication peer-review and editorial work typesPeer review responsibility

Virtual cell modelling of Pseudomonas aeruginosa PAO1

Yan Zhu (Speaker)
2017

Activity: Participating in or organising an event typesContribution to workshop, seminar, course

Vienna

Yan Zhu (Speaker)
2017

Activity: Participating in or organising an event typesContribution to conference