20002019
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Research Output 2000 2019

2019

A clustering-based ensemble approach with improved pigeon-inspired optimization and extreme learning machine for air quality prediction

Jiang, F., He, J. & Tian, T., 2019, In : Applied Soft Computing Journal. 85, p. 1-14 14 p., 105827.

Research output: Contribution to journalArticleResearchpeer-review

Asymptotic-numerical solvers for highly oscillatory second-order differential equations

Liu, Z., Tian, T. & Tian, H., 1 Mar 2019, In : Applied Numerical Mathematics. 137, p. 184-202 19 p.

Research output: Contribution to journalArticleResearchpeer-review

Mathematical modeling and dynamic analysis of anti-tumor immune response

Pang, L., Liu, S., Zhang, X. & Tian, T., 1 Jan 2019, (Accepted/In press) In : Journal of Applied Mathematics and Computing.

Research output: Contribution to journalArticleResearchpeer-review

Mathematical modelling the pathway of genomic instability in lung cancer

Li, L., Zhang, X., Tian, T. & Pang, L., 1 Dec 2019, In : Scientific Reports. 9, 1, 9 p., 14136.

Research output: Contribution to journalArticleResearchpeer-review

Open Access

Online Identification of Nonlinear Stochastic Spatiotemporal System with Multiplicative Noise by Robust Optimal Control-Based Kernel Learning Method

Ning, H., Qing, G., Tian, T. & Jing, X., 1 Feb 2019, In : IEEE Transactions on Neural Networks and Learning Systems. 30, 2, p. 389-404 16 p., 8399841.

Research output: Contribution to journalArticleResearchpeer-review

SCOUT: A new algorithm for the inference of pseudo-time trajectory using single-cell data

Wei, J., Zhou, T., Zhang, X. & Tian, T., 1 Jun 2019, In : Computational Biology and Chemistry. 80, p. 111-120 10 p.

Research output: Contribution to journalArticleResearchpeer-review

1 Citation (Scopus)

Stochastic modelling of multistage carcinogenesis and progression of human lung cancer

Li, L., Tian, T. & Zhang, X., 21 Oct 2019, In : Journal of Theoretical Biology. 479, p. 81-89 9 p.

Research output: Contribution to journalArticleResearchpeer-review

The Cost-Effectiveness Analysis and Optimal Strategy of the Tobacco Control

Pang, L., Liu, S., Zhang, X. & Tian, T., 1 Jan 2019, In : Computational and Mathematical Methods in Medicine. 2019, 15 p., 8189270.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
2018
1 Citation (Scopus)

Development of stock correlation network models using maximum likelihood method and stock big data

Guo, X., Zhang, H., Jiang, F. & Tian, T., 25 May 2018, Proceedings: 2018 IEEE International Conference on Big Data and Smart Computing. IEEE, Institute of Electrical and Electronics Engineers, p. 455-461 7 p. 8367153

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearch

4 Citations (Scopus)

Development of stock correlation networks using mutual information and financial big data

Guo, X., Zhang, H. & Tian, T., 1 Apr 2018, In : PLoS ONE. 13, 4, 16 p., e0195941.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Guest Editorial for Special Section on BIBM 2015

Tian, T. & Huang, J., 1 Nov 2018, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 15, 6, p. 1752-1753 2 p., 8573201.

Research output: Contribution to journalEditorialOtherpeer-review

Inference of model parameters using particle filter algorithm and Copula distributions

Deng, Z., Zhang, X. & Tian, T., 12 Nov 2018, (Accepted/In press) In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Inference of protein-protein networks for triple-negative breast cancer using single-patient proteomic data

Yan, Y., Wei, J., Hu, X. & Tian, T., Dec 2018, Proceedings: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). Zheng, H. J., Callejas, Z., Griol, D., Wang, H., Hu, X., Schmidt, H., Baumbach, J., Dickerson, J. & Zhang, L. (eds.). Piscataway NJ USA: IEEE, Institute of Electrical and Electronics Engineers, p. 2174-2181 8 p. 8621548. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

Instantaneous mutation rate in cancer initiation and progression

Sun, S., Klebaner, F. C., Zhang, X. & Tian, T., 22 Nov 2018, In : BMC Systems Biology. 12, Suppl 6, p. 91-98 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Mathematical Modelling of Genetic Network for Regulating the Fate Determination of Hematopoietic Stem Cells

Wu, S., Cui, T. & Tian, T., 21 Dec 2018, Proceedings: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). Zheng, H. J., Callejas, Z., Griol, D., Wang, H., Hu, X., Schmidt, H., Baumbach, J., Dickerson, J. & Zhang, L. (eds.). Piscataway NJ USA: IEEE, Institute of Electrical and Electronics Engineers, p. 2167-2173 7 p. 8621476. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

3 Citations (Scopus)

Mutation Mechanisms of Human Breast Cancer

Li, L., Tian, T. & Zhang, X., 1 Apr 2018, In : Journal of Computational Biology. 25, 4, p. 396-404 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

基于分解{ - 优化 - 集成学习方法的电价预测

Translated title of the contribution: Decomposition-optimization-ensemble learning approach for electricity price forecastingJiang, F., He, J., Zeng, Z. & Tian, T., Oct 2018, In : Zhongguo Kexue Xinxi Kexue. 48, 10, p. 1300-1315 16 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
2017

Inference method for developing mathematical models of cell signaling pathways using proteomic datasets

Tian, T. & Song, J., 2017, Bioinformatics: Volume II: Structure, Function, and Applications. Keith, J. M. (ed.). 2 ed. New York NY USA: Humana Press, Vol. 1526. p. 329-344 16 p. (Methods in Molecular Biology; vol. 1526).

Research output: Chapter in Book/Report/Conference proceedingChapter (Book)Researchpeer-review

Inference of Term Structure Models

Zhou, Y., Ge, X., Wu, Y. & Tian, T., 2017, Proceedings: 2016 International Conference on Identification, Information and Knowledge in the Internet of Things, IIKI 2016; Beijing; China; 20 October 2016 through 21 October 2016; Category number E6070. Piscataway NJ USA: IEEE, Institute of Electrical and Electronics Engineers, p. 553-558 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

1 Citation (Scopus)

Mathematical model for pancreatic cancer progression using non-constant gene mutation rate

Sun, S., Klebaner, F. & Tian, T., 15 Dec 2017, Proceedings: 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). Hu, X., Gong, Y., Shyu, C-R., Korkin, D., Bromberg, Y., Yoo, I., Gao, J. & Zheng, J. H. (eds.). Piscataway NJ USA: IEEE, Institute of Electrical and Electronics Engineers, Vol. 2017-January. p. 138-141 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

1 Citation (Scopus)

Mathematical modelling for variations of inbreeding populations fitness with single and polygenic traits

Sun, S., Klebaner, F. & Tian, T., 14 Mar 2017, In : BMC Genomics. 18, Suppl 2, 11 p., 196.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Preface

Wang, Y., Burrage, K., Liu, Y., Morishita, S., Tian, T., Jiang, Q., Song, J., Wang, G., Zhu, Q. & Hu, X. T., 17 Jan 2017, In : Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. 7822473.

Research output: Contribution to journalEditorialOtherpeer-review

1 Citation (Scopus)

Property and numerical simulation of the Ait-Sahalia-Rho model with nonlinear growth conditions

Jiang, F., Yang, H. & Tian, T., 1 Jan 2017, In : Discrete and Continuous Dynamical Systems - Series B. 22, 1, p. 101-113 13 p.

Research output: Contribution to journalArticleResearchpeer-review

2 Citations (Scopus)

Reverse-engineering of gene networks for regulating early blood development from single-cell measurements

Wei, J., Hu, X., Zou, X. & Tian, T., 28 Dec 2017, In : BMC Medical Genomics. 10, Suppl 5, 13 p., 72.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
5 Citations (Scopus)

The impact of radiation on the development of lung cancer

Li, L., Tian, T. & Zhang, X., 7 Sep 2017, In : Journal of Theoretical Biology. 428, p. 147-152 6 p.

Research output: Contribution to journalArticleResearchpeer-review

2016

A mathematical model for chaotic cancer evolution

Sun, S., Klebaner, F. C. & Tian, T., 2016, In : International Journal of Management and Applied Science. 2, 7, p. 153-157 5 p.

Research output: Contribution to journalArticleResearchpeer-review

A new cost-profit model for measuring the optimal scale of China’s foreign exchange reserve

Li, X. & Tian, T., 2016, In : Mathematical Problems in Engineering. 2016, p. 1-10 10 p., 9261297.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
6 Citations (Scopus)

An integrated approach to infer dynamic protein-gene interactions – a case study of the human P53 protein

Wang, J., Wu, Q., Hu, X. T. & Tian, T., 1 Nov 2016, In : Methods. 110, p. 3-13 11 p.

Research output: Contribution to journalArticleResearchpeer-review

12 Citations (Scopus)

Approximate method for stochastic chemical kinetics with two-time scales by chemical Langevin equations

Wu, F., Tian, T., Rawlings, J. B. & Yin, G., 2016, In : Journal of Chemical Physics. 144, p. 1-14 14 p., 174112.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Bayesian computation methods for inferring regulatory network models using biomedical data

Tian, T., 3 Nov 2016, Translational Biomedical Informatics: A Precision Medicine Perspective. Shen, B., Tang, H. & Jiang, X. (eds.). Singapore: Springer, p. 289-307 19 p. (Advances in Experimental Medicine and Biology; vol. 939).

Research output: Chapter in Book/Report/Conference proceedingChapter (Book)Researchpeer-review

Copula particle filter algorithm for inferring parameters of regulatory network models with noisy observation data

Deng, Z., Zhang, X. & Tian, T., 2016, Proceedings 2016 IEEE International Conference on Bioinformatics and Biomedicine. Tian, T., Wang, Y., Jiang, Q., Hu, X., Liu, Y., Morishita, S., Burrage, K., Zhu, Q., Song, J. & Wang, G. (eds.). Piscataway NJ USA: IEEE, Institute of Electrical and Electronics Engineers, p. 570-575 6 p. 7822583

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

2 Citations (Scopus)

Inference of genetic regulatory network for stem cell using single cells expression data

Wei, J., Hu, X., Zou, X. & Tian, T., 2016, Proceedings 2016 IEEE International Conference on Bioinformatics and Biomedicine. Tian, T., Wang, Y., Jiang, Q., Hu, X., Liu, Y., Morishita, S., Burrage, K., Zhu, Q., Song, J. & Wang, G. (eds.). Piscataway NJ USA: IEEE, Institute of Electrical and Electronics Engineers, p. 217-222 6 p. 7822521

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

2 Citations (Scopus)

Stability analysis for second-order stochastic neutral partial functional systems subject to infinite delays and impulses

Jiang, F., Yang, H. & Tian, T., 1 Dec 2016, In : Advances in Difference Equations. 2016, 1, p. 1-11 11 p., 224.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
2 Citations (Scopus)

Stochastic modeling of biochemical systems with multistep reactions using state-dependent time delay

Wu, Q. Q. & Tian, T., 24 Aug 2016, In : Scientific Reports. 6, p. 1-12 12 p., 31909.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
2015

A new approach for estimating probability of metastasis at diagnosis

Sun, S., Klebaner, F. & Tian, T., 2015, Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine. Huan, J. L., Miyano, S., Shehu, A., Hu, X., Ma, B., Rajasekaran, S., Gombar, V. K., Matthieu, I., Yoo, I., Zhou, J., Chen, B., Pai, V. & Pierce, B. (eds.). New York NY USA: IEEE, Institute of Electrical and Electronics Engineers, p. 653-656 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

Integrated study to infer dynamic protein-gene interactions in human P53 regulatory networks

Wang, J., Wu, Q. Q. & Tian, T., 2015, Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine. Huan, J. L., Miyano, S., Shehu, A., Hu, X., Ma, B., Rajasekaran, S., Gombar, V. K., Matthieu, I., Yoo, I., Zhou, J., Chen, B., Pai, V. & Pierce, B. (eds.). New York NY USA: IEEE, Institute of Electrical and Electronics Engineers, p. 273-276 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

6 Citations (Scopus)

Negative feedback contributes to the stochastic expression of the interferon-β gene in virus-triggered type I interferon signaling pathways

Zhang, W., Tian, T. & Zou, X., 2015, In : Mathematical Biosciences. 265, p. 12-27 16 p.

Research output: Contribution to journalArticleResearchpeer-review

2 Citations (Scopus)

Sensitivity and robustness analysis for stochastic model of nanog gene regulatory network

Wu, Q., Jiang, F. & Tian, T., 2015, In : International Journal of Bifurcation and Chaos in Applied Sciences and Engineering. 25, 7, p. 1-14 14 p., 1540009.

Research output: Contribution to journalArticleResearchpeer-review

2 Citations (Scopus)

Volatility analysis of Chinese stock market using high-frequency financial big data

Dong, T., Yang, B. & Tian, T., 2015, 2015 IEEE International Conference on Smart City. Cerin, C., Zhang, W. & Wang, H. (eds.). Piscataway NJ USA: IEEE, Institute of Electrical and Electronics Engineers, p. 769-774 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

2014
12 Citations (Scopus)

A continuous optimization approach for inferring parameters in mathematical models of regulatory networks

Deng, Z. & Tian, T., 2014, In : BMC Bioinformatics. 15, p. 1 - 12 12 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
2 Citations (Scopus)

A new approach for estimating the progression of pancreatic cancer

Sun, S., Klebaner, F. C. & Tian, T., 2014, 8th International Conference on Systems Biology (ISB). Chen, L., Zhang, X-S., Wu, L-Y. & Wang, Y. (eds.). New Jersey: IEEE, Institute of Electrical and Electronics Engineers, p. 118 - 123 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

1 Citation (Scopus)

A new mathematical model for inbreeding depression in large populations

Sun, S., Klebaner, F. C. & Tian, T., 2014, Bioinformatics Research and Applications. Basu, M., Pan, Y. & Wang, J. (eds.). Switzerland: Springer, Vol. 8492. p. 310 - 321 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

7 Citations (Scopus)

A new model of time scheme for progression of colorectal cancer

Sun, S., Klebaner, F. C. & Tian, T., 2014, In : BMC Systems Biology. 8, 3, p. 1 - 8 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
10 Citations (Scopus)

Approximate Bayesian computation schemes for parameter inference of discrete stochastic models using simulated likelihood density

Wu, Q. Q., Smith-Miles, K. A. & Tian, T., 2014, In : BMC Bioinformatics. 15, p. 1 - 10 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
1 Citation (Scopus)

Estimation of parameters in mean-reverting stochastic systems

Tian, T., Zhou, Y., Wu, Y. & Ge, X., 2014, In : Mathematical Problems in Engineering. 2014, p. 1 - 8 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access

Gene regulatory networks driven by intrinsic noise with two-time scales: a stochastic averaging approach

Wu, F., Yin, G. G. & Tian, T., 2014, In : Frontiers of Mathematics in China. 9, 4, p. 947 - 963 17 p.

Research output: Contribution to journalArticleResearchpeer-review

4 Citations (Scopus)

How MAP kinase modules function as robust, yet adaptable, circuits

Tian, T. & Harding, A. S., 2014, In : Cell Cycle. 13, 15, p. 2379 - 2390 12 p.

Research output: Contribution to journalArticleResearchpeer-review

24 Citations (Scopus)

Mathematical modeling of GATA-switching for regulating the differentiation of hematopoietic stem cell

Tian, T. & Smith-Miles, K. A., 2014, In : BMC Systems Biology. 8, 1, p. 1 - 12 12 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
2 Citations (Scopus)

Simplified stochastic models with time delay for studying the degradation process of mRNA molecules

Tian, T., 2014, In : International Journal of Data Mining and Bioinformatics. 10, 1, p. 18 - 32 15 p.

Research output: Contribution to journalArticleResearchpeer-review

2013
1 Citation (Scopus)

A new mathematical model for progression of colorectal cancer

Sun, S., Klebaner, F. C. & Tian, T., 2013, Proceedings - 2013 IEEE International Conference on Bioinformatics and Biomedicine. Li, G., Hu, X., Kim, S., Ressom, H., Hughes, M., Liu, B., McLachlan, G., Liebman, M. & Sun, H. (eds.). Piscataway NJ USA: IEEE, Institute of Electrical and Electronics Engineers, p. 560 - 565 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference PaperOtherpeer-review