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Research Output 1993 2019

2019

Pleistocene-dated biogeographic barriers drove divergence within the Australo-Papuan region in a sex-specific manner: an example in a widespread Australian songbird

Lamb, A. M., Gonçalves da Silva, A., Joseph, L., Sunnucks, P. & Pavlova, A., 1 Jan 2019, In : Heredity.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
2018

A model for first-estimates of species-specific, age-specific mortality from centralized band-recovery databases

Baylis, S. M., Sunnucks, P. & Clarke, R., 1 Apr 2018, In : Ecosphere. 9, 4, 24 p., e02136.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Artificial barriers prevent genetic recovery of small isolated populations of a low-mobility freshwater fish

Coleman, R. A., Gauffre, B., Pavlova, A., Beheregaray, L. B., Kearns, J., Lyon, J., Sasaki, M., Leblois, R., Sgro, C. & Sunnucks, P., 1 Jun 2018, In : Heredity. 120, 6, p. 515-532 18 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Call for a Paradigm Shift in the Genetic Management of Fragmented Populations

Ralls, K., Ballou, J. D., Dudash, M. R., Eldridge, M. D. B., Fenster, C. B., Lacy, R. C., Sunnucks, P. & Frankham, R., 1 Mar 2018, In : Conservation Letters. 11, 2, 6 p., e12412.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Climate-driven mitochondrial selection: A test in Australian songbirds

Lamb, A. M., Gan, H. M., Greening, C., Joseph, L., Lee, Y. P., Moran-Ordonez, A., Sunnucks, P. & Pavlova, A., 1 Feb 2018, In : Molecular Ecology. 27, 4, p. 898-918 21 p.

Research output: Contribution to journalArticleResearchpeer-review

Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climates

Morales, H. E., Pavlova, A., Amos, N., Major, R., Kilian, A., Greening, C. & Sunnucks, P., 1 Aug 2018, In : Nature Ecology and Evolution. 2, 8, p. 1258-1267 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Conservation and genetics

Fenster, C. B., Ballou, J. D., Dudash, M. R., Eldridge, M. D. B., Frankham, R., Lacy, R. C., Ralls, K. & Sunnucks, P., 1 Dec 2018, In : Yale Journal of Biology and Medicine. 91, 4, p. 491-501 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Estimates of wear rates in metal bird bands, with applications for survival and movement models of marked individuals

Baylis, S. M., Drynan, D., Clarke, N., Van, M., Sunnucks, P. & Clarke, R. H., Dec 2018, In : Journal of Field Ornithology. 89, 4, p. 393-406 14 p.

Research output: Contribution to journalArticleResearchpeer-review

Evaluating the success of wildlife crossing structures using genetic approaches and an experimental design: Lessons from a gliding mammal

Soanes, K., Taylor, A. C., Sunnucks, P., Vesk, P. A., Cesarini, S. & van der Ree, R., 1 Jan 2018, In : Journal of Applied Ecology. 55, 1, p. 129-138 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Patterns and drivers of aquatic invertebrate diversity across an arid biome

Davis, J., Sim, L., Thompson, R. M., Pinder, A., Box, J. B., Murphy, N. P., Sheldon, F., Morán-Ordóñez, A. & Sunnucks, P., Feb 2018, In : Ecography. 41, 2, p. 375-387 13 p.

Research output: Contribution to journalArticleResearchpeer-review

Population mitogenomics provides insights into evolutionary history, source of invasions and diversifying selection in the House Crow (Corvus splendens)

Krzemińska, U., Morales, H. E., Greening, C., Nyári, Á. S., Wilson, R., Song, B. K., Austin, C. M., Sunnucks, P., Pavlova, A. & Rahman, S., 2018, In : Heredity. 120, p. 296-309 14 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Song parameters of the fuscous honeyeater Lichenostomus fuscus correlate with habitat characteristics in fragmented landscapes

Goretskaia, M. I., Beme, I. R., Popova, D. V., Amos, N., Buchanan, K. L., Sunnucks, P. & Pavlova, A., 1 Feb 2018, In : Journal of Avian Biology. 49, 2, 11 p., e01493.

Research output: Contribution to journalArticleResearchpeer-review

2017

Assessing the scope for genetic rescue of an endangered butterfly: The case of the Eltham copper

Roitman, M., Gardner, M. G., New, T. R., Nguyen, T. T. T., Roycroft, E. J., Sunnucks, P., Yen, A. L. & Harrisson, K. A., Sep 2017, In : Insect Conservation and Diversity. 10, 5, p. 399-414

Research output: Contribution to journalArticleResearchpeer-review

De novo genome assembly and annotation of Australia’s largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanoporesequencing read

Austin, C. M., Hua, T. M., Harrisson, K. A., Lee, Y. P., Croft, L. J., Sunnucks, P., Pavlova, A. & Gan, H. M., 1 Aug 2017, In : GigaScience. 6, 8, 6 p., gix063.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Evolutionary divergence in freshwater insects with contrasting dispersal capacity across a sea of desert

Razeng, E., Smith, A. E., Harrisson, K. A., Pavlova, A., Nguyen, T., Pinder, A., Suter, P., Webb, J., Gardner, M. G., Brim-Box, J. C., Thompson, R., Davis, J. & Sunnucks, P., 1 Aug 2017, In : Freshwater Biology. 62, 8, p. 1443-1459 17 p.

Research output: Contribution to journalArticleResearchpeer-review

Genetic Management of Fragmented Animal and Plant Populations

Frankham, R., Ballou, J. D., Ralls, K., Eldridge, M. D. B., Dudash, M. R., Fenster, C. B., Lacy, R. C. & Sunnucks, P., 2017, Oxford UK: Oxford University Press. 391 p.

Research output: Book/ReportBookResearchpeer-review

Integrative approaches for studying mitochondrial and nuclear genome co-evolution in oxidative phosphorylation

Sunnucks, P., Morales, H., Lamb, A. M., Pavlova, A. & Greening, C., 3 Mar 2017, In : Frontiers in Genetics. 8, 12 p., 25.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

MHC class II β exon 2 variation in pardalotes (Pardalotidae) is shaped by selection, recombination and gene conversion

Balasubramaniam, S., Mulder, R. A., Sunnucks, P., Pavlova, A. & Melville, J., 2017, In : Immunogenetics. 69, 2, p. 101-111 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Monitoring ecological consequences of efforts to restore landscape-scale connectivity

Watson, D., Doerr, V. A. J., Banks, S. C., Driscoll, D. A., van der Ree, R., Doerr, E. D. & Sunnucks, P., 1 Feb 2017, In : Biological Conservation. 206, p. 201-209 9 p.

Research output: Contribution to journalComment / DebateResearchpeer-review

Neutral and selective drivers of colour evolution in a widespread Australian passerine

Morales, H., Pavlova, A., Sunnucks, P., Major, R., Amos, N., Joseph, L., Wang, B., Lemmon, A. R., Endler, J. A. & Delhey, K., 1 Mar 2017, In : Journal of Biogeography. 44, 3, p. 522-536 15 p.

Research output: Contribution to journalArticleResearchpeer-review

Perpendicular axes of differentiation generated by mitochondrial introgression

Morales, H. E., Sunnucks, P., Joseph, L. & Pavlova, A., 1 Jun 2017, In : Molecular Ecology. 26, 12, p. 3241-3255 15 p.

Research output: Contribution to journalArticleResearchpeer-review

Purifying selection and genetic drift shaped Pleistocene evolution of the mitochondrial genome in an endangered Australian freshwater fish

Pavlova, A., Gan, H. M., Lee, Y. P., Austin, C., Gilligan, D. M., Lintermans, M. & Sunnucks, P., May 2017, In : Heredity. 118, 5, p. 466-477 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Severe consequences of habitat fragmentation on genetic diversity of an endangered Australian freshwater fish: A call for assisted gene flow

Pavlova, A., Beheregaray, L. B., Coleman, R., Gilligan, D. M., Harrisson, K. A., Ingram, B. A., Kearns, J., Lamb, A. M., Lintermans, M., Lyon, J., Nguyen, T. T. T., Sasaki, M., Tonkin, Z. D., Yen, J. D. L. & Sunnucks, P., 1 Jul 2017, In : Evolutionary Applications. 10, 6, p. 531-550 20 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Signatures of polygenic adaptation associated with climate across the range of a threatened fish species with high genetic connectivity

Harrisson, K. A., Amish, S. J., Pavlova, A., Narum, S. R., Telonis-Scott, M., Rourke, M. L., Lyon, J., Tonkin, Z., Gilligan, D. M., Ingram, B. A., Lintermans, M., Gan, H. M., Austin, C. M., Luikart, G. & Sunnucks, P., 1 Nov 2017, In : Molecular Ecology. 26, 22, p. 6253-6269 17 p.

Research output: Contribution to journalArticleResearchpeer-review

2016

A potential role for overland dispersal in shaping aquatic invertebrate communities in arid regions

Razeng, E., Moran-Ordonez, A., Box, J. B., Thompson, R., Davis, J. & Sunnucks, P., 2016, In : Freshwater Biology. 61, 5, p. 745-757 13 p.

Research output: Contribution to journalArticleResearchpeer-review

Evidence of subdivisions on evolutionary timescales in a large, declining marsupial distributed across a phylogeographic barrier

Alpers, D. L., Walker, F. M., Taylor, A. C., Sunnucks, P., Bellman, S., Hansen, B. D. & Sherwin, W. B., 12 Oct 2016, In : PLoS ONE. 11, 10, 22 p., e0162789.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Genetic factors in threatened species recovery plans on three continents

Pierson, J. C., Coates, D. J., Oostermeijer, J. G. B., Beissinger, S. R., Bragg, J. G., Sunnucks, P., Schumaker, N. H. & Young, A. G., 3 Oct 2016, In : Frontiers in Ecology and the Environment. 14, 8, p. 433-440 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Genomics in conservation: case studies and bridging the gap between data and application

Garner, B. A., Hand, B. K., Amish, S. J., Bernatchez, L., Foster, J. T., Miller, K. M., Morin, P. A., Narum, S. R., O'Brien, S. J., Roffler, G., Templin, W. D., Sunnucks, P., Strait, J., Warheit, K. I., Seamons, T. R., Wenburg, J., Olsen, J. B. & Luikart, G., 2016, In : Trends in Ecology and Evolution. 31, 2, p. 81-83 3 p.

Research output: Contribution to journalLetterResearchpeer-review

Identifying environmental correlates of intraspecific genetic variation

Harrisson, K. A., Louey Yen, J. D., Pavlova, A., Rourke, M. L., Gilligan, D. M., Ingram, B., Lyon, J., Tonkin, Z. D. & Sunnucks, P., 1 Sep 2016, In : Heredity. 117, 3, p. 155-164 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Incest avoidance, extrapair paternity, and territory quality drive divorce in a year-round territorial bird

Hidalgo Aranzamendi, N., Hall, M. L., Kingma, S. A., Sunnucks, P. & Peters, A., 2016, In : Behavioral Ecology. 27, 6, p. 1808–1819 12 p.

Research output: Contribution to journalArticleResearchpeer-review

New data from basal Australian songbird lineages show that complex structure of MHC class II β genes has early evolutionary origins within passerines

Balasubramaniam, S., Bray, R. D., Mulder, R. A., Sunnucks, P., Pavlova, A. & Melville, J., 21 May 2016, In : BMC Evolutionary Biology. 16, 1, p. 1-11 11 p., 112.

Research output: Contribution to journalArticleResearchpeer-review

Open Access

Pleistocene divergence across a mountain range and the influence of selection on mitogenome evolution in threatened Australian freshwater cod species

Harrisson, K., Pavlova, A., Gan, H. M., Yin Peng, L., Austin, C. & Sunnucks, P., 1 Jun 2016, In : Heredity. 116, 6, p. 506-515 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Scope for genetic rescue of an endangered subspecies though re-establishing natural gene flow with another subspecies

Harrisson, K., Pavlova, A., Goncalves da Silva, A., Rose, R. J., Bull, J. K., Lancaster, M. L., Murray, N., Quin, B., Menkhorst, P., Magrath, M. J. L. & Sunnucks, P., 2016, In : Molecular Ecology. 25, 6, p. 1242-1258 17 p.

Research output: Contribution to journalArticleResearchpeer-review

2015

Aquatic communities in arid landscapes: local conditions, dispersal traits and landscape configuration determine local biodiversity

Moran-Ordonez, A., Pavlova, A., Pinder, A. M., Sim, L., Sunnucks, P., Thompson, R. & Davis, J., 2015, In : Diversity and Distributions. 21, 10, p. 1230-1241 12 p.

Research output: Contribution to journalArticleResearchpeer-review

Bird diversity increases after patchy prescribed fire: Implications from a before-after control-impact study

Sitters, H., Di Stefano, J., Christie, F. J., Sunnucks, P. & York, A., 2015, In : International Journal of Wildland Fire. 24, 5, p. 690 - 701 12 p.

Research output: Contribution to journalArticleResearchpeer-review

Characterization of MHC class IIB for four endangered Australian freshwater fishes obtained from ecologically divergent populations

Bracamonte, S. E., Smith, S., Hammer, M., Pavey, S. A., Sunnucks, P. & Beheregaray, L. B., 2015, In : Fish and Shellfish Immunology. 46, 2, p. 468 - 476 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Incorporating evolutionary processes into population viability models

Pierson, J. C., Beissinger, S. R., Bragg, J. G., Coates, D. J., Oostermeijer, J. G. B., Sunnucks, P., Schumaker, N. H., Trotter, M. V. & Young, A. G., 2015, In : Conservation Biology. 29, 3, p. 755 - 764 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Incorporating landscape genetics into road ecology

Sunnucks, P. & Balkenhol, N., 2015, Handbook of Road Ecology. van der Ree, R., Smith, D. J. & Grilo, C. (eds.). Chichester West Sussex UK: Wiley-Blackwell, p. 110 - 118 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter (Book)Researchpeer-review

Positive and purifying selection in mitochondrial genomes of a bird with mitonuclear discordance

Morales, H., Pavlova, A., Joseph, L. G. & Sunnucks, P., 2015, In : Molecular Ecology. 24, 11, p. 2820 - 2837 18 p.

Research output: Contribution to journalArticleResearchpeer-review

Swimming through sand: connectivity of aquatic fauna in deserts

Murphy, A., Pavlova, A., Thompson, R., Davis, J. A. & Sunnucks, P., 2015, In : Ecology and Evolution. 5, 22, p. 5252-5264 13 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Very low population structure in a highly mobile and wide-ranging endangered bird species

Kvistad, L., Ingwersen, D., Pavlova, A., Bull, J. K. & Sunnucks, P., 2015, In : PLoS ONE. 10, 12, p. 1-20 20 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
2014

Co-gradient variation in growth rate and development time of a broadly distributed butterfly

Barton, M., Sunnucks, P., Norgate, M. B., Murray, N. & Kearney, M., 2014, In : PLoS ONE. 9, 4, 8 p., e95258.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Distribution and rapid range expansion of the introduced willow sawfly Nematus oligospilus Forster (Hymenoptera: Tenthredinidae) in Australasia

Caron, V., Ede, F. J., Sunnucks, P. & O'Dowd, D. J., 2014, In : Austral Entomology. 53, 2, p. 175 - 182 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Does reduced mobility through fragmented landscapes explain patch extinction patterns for three honeyeaters?

Harrisson, K., Pavlova, A., Amos, N., Radford, J. Q. & Sunnucks, P., 2014, In : Journal of Animal Ecology. 83, 3, p. 616 - 627 12 p.

Research output: Contribution to journalArticleResearchpeer-review

Integrating phylogeography and morphometrics to assess conservation merits and inform conservation strategies for an endangered subspecies of a common bird species

Pavlova, A., Selwood, P. M., Harrisson, K., Murray, N., Quin, B., Menkhorst, P., Smales, I. & Sunnucks, P., 2014, In : Biological Conservation. 174, p. 136 - 146 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Species- and sex-specific connectivity effects of habitat fragmentation in a suite of woodland birds

Amos, N., Harrisson, K., Radford, J. Q., White, M. D., Newell, G. R., Mac Nally, R. C., Sunnucks, P. & Pavlova, A., 2014, In : Ecology. 95, 6, p. 1556 - 1568 13 p.

Research output: Contribution to journalArticleResearchpeer-review

Unravelling the paradox of loss of genetic variation during invasion: superclones may explain the success of a clonal invader

Caron, V., Ede, F. J. & Sunnucks, P., 2014, In : PLoS ONE. 9, 6, 10 p., e97744.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Using genomics to characterize evolutionary potential for conservation of wild populations

Harrisson, K., Pavlova, A., Telonis-Scott, M. & Sunnucks, P., 2014, In : Evolutionary Applications. 7, 9, p. 1008 - 1025 18 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
2013

Building the climate resilience of arid zone freshwater biota

Davis, J. A., Sunnucks, P., Thompson, R., Sim, L., Pavlova, A., Moran-Ordonez, A., Brim-Box, J. C., McBurnie, G., Pinder, A., Choy, S., McNeil, D., Hughes, J. M., Sheldon, F. & Timms, B. V., 2013, 1 ed. Australia: National Climate Change Adaptation Research Facility. 30 p.

Research output: Book/ReportCommissioned ReportResearch