Research output per year
Research output per year
Personal profile
Biography
Jane undertook her PhD in bacterial genomics, focusing on the mobile elements that are responsible for disseminating antimicrobial resistance. During her PhD she developed the software ISMapper for enabling the detection of insertion sequences from short-read sequencing data. She has been a postdoctoral research fellow since 2017 with a focus on the genomic evolution of hospital pathogens. She is particularly interested in developing new genomic methods to track mobile genetic elements that are shared between pathogens, and assess their impact in a hospital setting.
Education/Academic qualification
Microbial Genomics, PhD, University of Melbourne
Award Date: 5 Dec 2017
Microbiology, Bachelor of Science (Honours), University of Melbourne
Award Date: 3 Dec 2012
Research area keywords
- Bacterial genomics
- Mobile genetic elements
- Plasmids
- Antimicrobial resistance
Network
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Species interactions constrain adaptation and preserve ecological stability in an experimental microbial community
Barber, J. N., Nicholson, L. C., Woods, L. C., Judd, L. M., Sezmis, A. L., Hawkey, J., Holt, K. E. & McDonald, M. J., 22 Jan 2022, In: The ISME Journal. 16, p. 1442–1452 11 p.Research output: Contribution to journal › Article › Research › peer-review
Open Access -
Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients
Wyres, K. L., Hawkey, J., Mirčeta, M., Judd, L. M., Wick, R. R., Gorrie, C. L., Pratt, N. F., Garlick, J. S., Watson, K. M., Pilcher, D. V., McGloughlin, S. A., Abbott, I. J., Macesic, N., Spelman, D. W., Jenney, A. W. J. & Holt, K. E., 14 Jul 2021, In: BMC Infectious Diseases. 21, 1, 11 p., 683.Research output: Contribution to journal › Article › Research › peer-review
Open Access1 Citation (Scopus) -
Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei
Hawkey, J., Paranagama, K., Baker, K. S., Bengtsson, R. J., Weill, F. X., Thomson, N. R., Baker, S., Cerdeira, L., Iqbal, Z., Hunt, M., Ingle, D. J., Dallman, T. J., Jenkins, C., Williamson, D. A. & Holt, K. E., Dec 2021, In: Nature Communications. 12, 1, 12 p., 2684.Research output: Contribution to journal › Article › Research › peer-review
Open Access5 Citations (Scopus) -
Pandora: nucleotide-resolution bacterial pan-genomics with reference graphs
Colquhoun, R. M., Hall, M. B., Lima, L., Roberts, L. W., Malone, K. M., Hunt, M., Letcher, B., Hawkey, J., George, S., Pankhurst, L. & Iqbal, Z., Dec 2021, In: Genome Biology. 22, 1, 30 p., 267.Research output: Contribution to journal › Article › Research › peer-review
Open Access1 Citation (Scopus) -
Silent spread of mobile colistin resistance gene mcr-9.1 on IncHI2 ‘superplasmids’ in clinical carbapenem-resistant Enterobacterales
Macesic, N., Blakeway, L. V., Stewart, J. D., Hawkey, J., Wyres, K. L., Judd, L. M., Wick, R. R., Jenney, A. W., Holt, K. E. & Peleg, A. Y., Dec 2021, In: Clinical Microbiology and Infection. 27, 12, p. 1856.e7-1856.e13 7 p.Research output: Contribution to journal › Article › Research › peer-review
Open Access7 Citations (Scopus)