James Trauer

Assoc Professor

Accepting PhD Students

PhD projects

Modelling of TB transmission dynamics in high and low burden settings. Software development for infectious disease transmission modelling.

20082020

Research output per year

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Research Output

2020

Estimating Long-term Tuberculosis Reactivation Rates in Australian Migrants

Dale, K. D., Trauer, J. M., Dodd, P. J., Houben, R. M. G. J. & Denholm, J. T., 6 May 2020, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 70, 10, p. 2111-2118 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Heterogeneous infectiousness in mathematical models of tuberculosis: A systematic review

Melsew, Y. A., Adekunle, A. I., Cheng, A. C., McBryde, E. S., Ragonnet, R. & Trauer, J. M., Mar 2020, In : Epidemics. 30, 10 p., 100374.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Modelling the impact of COVID-19 on intensive care services in New South Wales

Fox, G. J., Trauer, J. M. & McBryde, E., Jun 2020, In : Medical Journal of Australia. 212, 10, p. 468-469 2 p.

Research output: Contribution to journalLetterOtherpeer-review

Open Access
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4 Citations (Scopus)
2019

Cost-effectiveness of 3 months of weekly rifapentine and isoniazid compared with other standard treatment regimens for latent tuberculosis infection: a decision analysis study

Doan, T. N., Fox, G. J., Meehan, M. T., Scott, N., Ragonnet, R., Viney, K., Trauer, J. M. & McBryde, E. S., 1 Jan 2019, In : Journal of Antimicrobial Chemotherapy. 74, 1, p. 218-227 10 p., dky403.

Research output: Contribution to journalArticleResearchpeer-review

4 Citations (Scopus)

Hyper transmission of Beijing lineage Mycobacterium tuberculosis: Systematic review and Meta-analysis

Karmakar, M., Trauer, J. M., Ascher, D. B. & Denholm, J. T., Dec 2019, In : Journal of Infection. 79, 6, p. 572-581 10 p.

Research output: Contribution to journalArticleResearchpeer-review

2 Citations (Scopus)

Modelling tuberculosis control priorities: more of the same will not do

Wejse, C., Ragonnet, R., McBryde, E. S. & Trauer, J. M., Oct 2019, In : The Lancet Global Health. 7, 10, p. e1319 1 p.

Research output: Contribution to journalLetterOtherpeer-review

Open Access
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Mycobacterium tuberculosis: Active disease and latent infection in a renal transplant cohort

Rafiei, N., Williams, J., Mulley, W. R., Trauer, J. M., Jenkin, G. A. & Rogers, B. A., 1 May 2019, In : Nephrology. 24, 5, p. 569-574 6 p.

Research output: Contribution to journalArticleResearchpeer-review

2 Citations (Scopus)

Profiles of tuberculosis disease activation among contacts of patients with tuberculosis

Melsew, Y. A., Cheng, A. C., McBryde, E. S., Denholm, J. T., Tay, E. L., Ragonnet, R. & Trauer, J. M., Oct 2019, In : European Respiratory Journal. 54, 4, 5 p., 1900353.

Research output: Contribution to journalLetterResearchpeer-review

Open Access
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Profiling Mycobacterium tuberculosis transmission and the resulting disease burden in the five highest tuberculosis burden countries

Ragonnet, R., Trauer, J. M., Geard, N., Scott, N. & McBryde, E. S., 22 Nov 2019, In : BMC Medicine. 17, 1, 12 p., 208.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Strategic investment in tuberculosis control in the Republic of Bulgaria

Doan, T. N., Varleva, T., Zamfirova, M., Tyufekchieva, M., Keshelava, A., Hristov, K., Yaneva, A., Gadzheva, B., Zhang, S., Irbe, S., Ragonnet, R., McBryde, E. S. & Trauer, J. M., 18 Nov 2019, In : Epidemiology and Infection. 147, p. e304 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Strategic planning for tuberculosis control in the Republic of Fiji

Ragonnet, R., Underwood, F., Doan, T., Rafai, E., Trauer, J. & McBryde, E., 24 Apr 2019, In : Tropical Medicine and Infectious Disease. 4, 2, 12 p., 71.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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3 Citations (Scopus)

TB, you’re a long time cured

Trauer, J. M., 1 Mar 2019, In : European Respiratory Journal. 53, 3, 2 p., 1900104.

Research output: Contribution to journalEditorialOtherpeer-review

Open Access
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The Importance of Heterogeneity to the Epidemiology of Tuberculosis

Trauer, J. M., Dodd, P. J., Gomes, M. G. M., Gomez, G. B., Houben, R. M. G. J., McBryde, E., Melsew, Y. A., Menzies, N. A., Arinaminpathy, N., Shrestha, S. & Dowdy, D. W., 18 Jun 2019, In : Clinical Infectious Diseases. 69, 1, p. 159-166 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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8 Citations (Scopus)

The role of super-spreading events in Mycobacterium tuberculosis transmission: Evidence from contact tracing

Melsew, Y. A., Gambhir, M., Cheng, A. C., McBryde, E. S., Denholm, J. T., Tay, E. L. & Trauer, J. M., 12 Mar 2019, In : BMC Infectious Diseases. 19, 1, 9 p., 244.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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4 Citations (Scopus)
2018

Agent-based models of malaria transmission: A systematic review

Smith, N. R., Trauer, J. M., Gambhir, M., Richards, J. S., Maude, R. J., Keith, J. M. & Flegg, J. A., 17 Aug 2018, In : Malaria Journal. 17, 1, 16 p., 299.

Research output: Contribution to journalReview ArticleResearchpeer-review

Open Access
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5 Citations (Scopus)

Appropriate comparisons of tuberculosis latency structures with empiric data

Trauer, J. M., Ragonnet, R. & McBryde, E. S., 1 Jul 2018, In : The Lancet Infectious Diseases. 18, 7, p. 720-721 2 p.

Research output: Contribution to journalLetterOtherpeer-review

1 Citation (Scopus)

Coupled, multi-strain epidemic models of mutating pathogens

Meehan, M. T., Cocks, D. G., Trauer, J. M. & McBryde, E. S., 1 Feb 2018, In : Mathematical Biosciences. 296, p. 82-92 11 p.

Research output: Contribution to journalArticleResearchpeer-review

2 Citations (Scopus)

Estimating the prevalence of latent tuberculosis in a low-incidence setting: Australia

Dale, K. D., Trauer, J. M., Dodd, P. J., Houben, R. M. G. J. & Denholm, J. T., 1 Jan 2018, In : European Respiratory Journal. 52, 6, 10 p., 1801218.

Research output: Contribution to journalArticleResearchpeer-review

3 Citations (Scopus)

Fifty years of plummeting cardiovascular death rates and implications for the individual

Trauer, J. M., Freak-Poli, R., Kippen, R. & McNeil, J., 26 May 2018, In : Australian Population Studies. 2, 1, p. 52-55 3 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Methods used in the spatial analysis of tuberculosis epidemiology: A systematic review

Shaweno, D., Karmakar, M., Alene, K. A., Ragonnet, R., Clements, A. C., Trauer, J. M., Denholm, J. T. & McBryde, E. S., 18 Oct 2018, In : BMC Medicine. 16, 1, 18 p., 193.

Research output: Contribution to journalReview ArticleResearchpeer-review

Open Access
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14 Citations (Scopus)

Modelling heterogeneity in host susceptibility to tuberculosis and its effect on public health interventions

Wangari, I. M., Trauer, J. & Stone, L., 14 Nov 2018, In : PLoS ONE. 13, 11, 26 p., e0206603.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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1 Citation (Scopus)

Risk factors for infectiousness of patients with tuberculosis: a systematic review and meta-analysis

Melsew, Y. A., Doan, T. N., Gambhir, M., Cheng, A. C., McBryde, E. & Trauer, J. M., Feb 2018, In : Epidemiology and Infection. 146, 3, p. 345-353 9 p.

Research output: Contribution to journalArticleResearchpeer-review

10 Citations (Scopus)

The role of geospatial hotspots in the spatial spread of tuberculosis in rural Ethiopia: A mathematical model

Shaweno, D., Trauer, J. M., Denholm, J. T. & McBryde, E. S., 1 Sep 2018, In : Royal Society Open Science. 5, 9, 11 p., 180887.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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1 Citation (Scopus)
2017

A novel Bayesian geospatial method for estimating tuberculosis incidence reveals many missed TB cases in Ethiopia

Shaweno, D., Trauer, J. M., Denholm, J. T. & McBryde, E. S., 2 Oct 2017, In : BMC Infectious Diseases. 17, 1, 8 p., 662.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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5 Citations (Scopus)

A user-friendly mathematical modelling web interface to assist local decision making in the fight against drug-resistant tuberculosis

Ragonnet, R., Trauer, J. M., Denholm, J. T., Marais, B. J. & McBryde, E. S., 30 May 2017, In : BMC Infectious Diseases. 17, 1, 5 p., 374.

Research output: Contribution to journalLetterOtherpeer-review

Open Access
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1 Citation (Scopus)

Comparing tuberculosis management under public and private healthcare providers: Victoria, Australia, 2002-2015

Dale, K. D., Tay, E. L., Trauer, J. M., Trevan, P. G. & Denholm, J. T., 3 May 2017, In : BMC Infectious Diseases. 17, 1, 12 p., 324.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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3 Citations (Scopus)

Gender differences in tuberculosis diagnosis, treatment and outcomes in Victoria, Australia, 2002–2015

Dale, K., Tay, E., Trauer, J. M., Trevan, P. & Denholm, J., 1 Dec 2017, In : International Journal of Tuberculosis and Lung Disease. 21, 12, p. 1264-1271 8 p.

Research output: Contribution to journalReview ArticleResearchpeer-review

3 Citations (Scopus)

Heterogeneity of distribution of Ttuberculosis in Sheka Zone, Ethiopia: Drivers and temporal trends

Shaweno, D., Shaweno, T., Trauer, J. M., Denholm, J. T. & Mcbryde, E. S., Jan 2017, In : International Journal of Tuberculosis and Lung Disease. 21, 1, p. 79-85 8 p.

Research output: Contribution to journalArticleResearchpeer-review

6 Citations (Scopus)

High rates of multidrug-resistant and rifampicin-resistant tuberculosis among re-treatment cases: where do they come from?

Ragonnet, R., Trauer, J. M., Denholm, J. T., Marais, B. J. & Mcbryde, E. S., 6 Jan 2017, In : BMC Infectious Diseases. 17, 1, 10 p., 36.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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22 Citations (Scopus)

Insights into the origin and identity of the discipline of public health: Public health: a very short introduction

Trauer, J. M., 18 Sep 2017, In : The Medical Journal of Australia. 207, 6, p. 239-239 1 p.

Research output: Contribution to journalShort ReviewOtherpeer-review

Is IPT more Effective in High Burden Settings? Modelling the Effect of TB Incidence on IPT Impact

Ragonnet, R., Trauer, J. M., Mcbryde, E. S., Houben, R. M. G. J., Denholm, J. T., Handel, A. & Sumner, T., Jan 2017, In : International Journal of Tuberculosis and Lung Disease. 21, 1, p. 60-66 7 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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10 Citations (Scopus)

Maximising value for money of tuberculosis investment in the Philippines

Garfin, A. M. C., Gaviola, D. M., Camacho, E., Nalda, R., Mantala, M., Magboo, S., Yadav, R., Doan, T. N., Trauer, J., Ragonnet, R. & McBryde, E., Jan 2017, Manila Philippines: Department of Health Department of Health Philippines. 108 p.

Research output: Book/ReportCommissioned ReportResearch

Open Access
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Modular programming for tuberculosis control, the "AuTuMN" platform

Trauer, J. M., Ragonnet, R., Doan, T. N. & McBryde, E. S., 7 Aug 2017, In : BMC Infectious Diseases. 17, 1, 12 p., 546.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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5 Citations (Scopus)

Optimally capturing latency dynamics in models of tuberculosis transmission

Ragonnet, R., Trauer, J. M., Scott, N., Meehan, M. T., Denholm, J. T. & McBryde, E. S., 1 Dec 2017, In : Epidemics. 21, p. 39-47 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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12 Citations (Scopus)

Optimising strategic investments in tuberculosis in the Republic of Bulgaria

Trauer, J., Doan, T. N., Ragonnet, R., McBryde, E., Varleva, T., Zamfirova, M., Tyufekchieva, M., Keshelava, A., Todorova, C., Ivanova, T., Gavazova, B. & Hristov, K., Jun 2017, Sofia Bulgaria: Ministry of Health, Republic of Bulgaria. 98 p.

Research output: Book/ReportCommissioned ReportResearch

Quantifying the Effects of Prior Acetyl-Salicylic Acid on Sepsis-Related Deaths: An Individual Patient Data Meta-Analysis Using Propensity Matching

Trauer, J., Muhi, S., McBryde, E. S., Al Harbi, S. A., Arabi, Y. M., Boyle, A. J., Cartin-Ceba, R., Chen, W., Chen, Y-T., Falcone, M., Gajic, O., Godsell, J., Gong, M. N., Kor, D., Lösche, W., McAuley, D. F., O'Neal, H. R., Osthoff, M., Otto, G. P., Sossdorf, M. & 9 others, Tsai, M. J., Valerio-Rojas, J. C., van der Poll, T., Violi, F., Ware, L., Widmer, A. F., Wiewel, M. A., Winning, J. & Eisen, D. P., 1 Nov 2017, In : Critical Care Medicine. 45, 11, p. 1871-1879 9 p.

Research output: Contribution to journalArticleResearchpeer-review

11 Citations (Scopus)

Recurrence of tuberculosis in a low-incidence setting without directly observed treatment: Victoria, Australia, 2002-2014

Dale, K. D., Globan, M. S., Tay, E. L., Trauer, J. M., Trevan, P. G. & Denholm, J. T., May 2017, In : International Journal of Tuberculosis and Lung Disease. 21, 5, p. 550-555 6 p.

Research output: Contribution to journalArticleResearchpeer-review

8 Citations (Scopus)

Strategic investment in tuberculosis control: maximising impact of future programs in Fiji

Underwood, F., Taylor, V., Lindsey, R., Kalo, J., Namedre, M., Daulako, M., Yadav, S., Trauer, J., Doan, T. N., McBryde, E. & Ragonnet, R., Feb 2017, Suva Fiji: Ministry of Health of Fiji. 119 p.

Research output: Book/ReportCommissioned ReportResearch

The risk of global epidemic replacement with drug-resistant Mycobacterium tuberculosis strains

Mcbryde, E. S., Meehan, M. T., Doan, T. N., Ragonnet, R., Marais, B. J., Guernier, V. & Trauer, J. M., Mar 2017, In : International Journal of Infectious Diseases. 56, p. 14-20 7 p.

Research output: Contribution to journalReview ArticleResearchpeer-review

Open Access
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33 Citations (Scopus)

Tuberculosis screening in an aged care residential facility in a low-incidence setting

Moyo, N., Trauer, J. M., Trevan, P., Baker, A-M., Musemburi, J., McGrath, K., Nolan, A., McIntyre, E., Hulls, J. & Denholm, J. T., 1 Sep 2017, In : Communicable Diseases Intelligence Quarterly Report. 41, 3, p. E209-E211 3 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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2016

Controlled fire use in early humans might have triggered the evolutionary emergence of tuberculosis

Chisholm, R. H., Trauer, J. M., Curnoe, D. & Tanaka, M. M., 9 Aug 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 32, p. 9051-9056 6 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
14 Citations (Scopus)

Cost-effectiveness and resource implications of aggressive action on tuberculosis in China, India, and South Africa: a combined analysis of nine models

Menzies, N. A., Gomez, G. B., Bozzani, F., Chatterjee, S., Foster, N., Baena, I. G., Laurence, Y. V., Qiang, S., Siroka, A., Sweeney, S., Verguet, S., Arinaminpathy, N., Azman, A. S., Bendavid, E., Chang, S. T., Cohen, T., Denholm, J. T., Dowdy, D. W., Eckhoff, P. A., Goldhaber-Fiebert, J. D. & 36 others, Handel, A., Huynh, G. H., Lalli, M., Lin, H. H., Mandal, S., McBryde, E. S., Pandey, S., Salomon, J. A., Suen, S. C., Sumner, T., Trauer, J. M., Wagner, B. G., Whalen, C. C., Wu, C. Y., Boccia, D., Chadha, V. K., Charalambous, S., Chin, D. P., Churchyard, G., Daniels, C., Dewan, P., Ditiu, L., Eaton, J. W., Grant, A. D., Hippner, P., Hosseini, M., Mametja, D., Pretorius, C., Pillay, Y., Rade, K., Sahu, S., Wang, L., Houben, R. M. G. J., Kimerling, M. E., White, R. G. & Vassall, A., 1 Nov 2016, In : The Lancet Global Health. 4, 11, p. e816-e826 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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38 Citations (Scopus)

Feasibility of achieving the 2025 WHO global tuberculosis targets in South Africa, China, and India: a combined analysis of 11 mathematical models

Houben, R. M. G. J., Menzies, N. A., Sumner, T., Huynh, G. H., Arinaminpathy, N., Goldhaber-Fiebert, J. D., Lin, H. H., Wu, C. Y., Mandal, S., Pandey, S., Suen, S. C., Bendavid, E., Azman, A. S., Dowdy, D. W., Bacaër, N., Rhines, A. S., Feldman, M. W., Handel, A., Whalen, C. C., Chang, S. T. & 30 others, Wagner, B. G., Eckhoff, P. A., Trauer, J. M., Denholm, J. T., McBryde, E. S., Cohen, T., Salomon, J. A., Pretorius, C., Lalli, M., Eaton, J. W., Boccia, D., Hosseini, M., Gomez, G. B., Sahu, S., Daniels, C., Ditiu, L., Chin, D. P., Wang, L., Chadha, V. K., Rade, K., Dewan, P., Hippner, P., Charalambous, S., Grant, A. D., Churchyard, G., Pillay, Y., Mametja, L. D., Kimerling, M. E., Vassall, A. & White, R. G., 1 Nov 2016, In : The Lancet Global Health. 4, 11, p. e806-e815

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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59 Citations (Scopus)

In response: Cognitive Behavioral Therapy for Chronic Insomnia

Trauer, J. M. & Cunnington, D., 19 Jan 2016, In : Annals of Internal Medicine. 164, 2, p. 134-135 2 p.

Research output: Contribution to journalLetterOtherpeer-review

2 Citations (Scopus)

Modelling the effect of short-course multidrug-resistant tuberculosis treatment in Karakalpakstan, Uzbekistan

Trauer, J. M., Achar, J., Parpieva, N., Khamraev, A., Denholm, J. T., Falzon, D., Jaramillo, E., Mesic, A., Du Cros, P. & Mcbryde, E. S., 18 Nov 2016, In : BMC Medicine. 14, 1, 187.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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5 Citations (Scopus)

Risk of active tuberculosis in the five years following infection ⋯ 15%?

Trauer, J. M., Moyo, N., Tay, E-L., Dale, K., Ragonnet, R., Mcbryde, E. S. & Denholm, J., Feb 2016, In : Chest. 149, 2, p. 516-525 10 p.

Research output: Contribution to journalArticleResearchpeer-review

34 Citations (Scopus)

Scenario analysis for programmatic tuberculosis control in Western Province, Papua New Guinea

Mcbryde, E. S., Denholm, J. T., Waseem, S. & Trauer, J., 2016, Melbourne Victoria: Burnet Institute. 98 p.

Research output: Book/ReportCommissioned ReportResearch

Scenario analysis for programmatic tuberculosis control in Western Province, Papua New Guinea

Trauer, J. M., Denholm, J. T., Waseem, S., Ragonnet, R. & Mcbryde, E. S., 15 Jun 2016, In : American Journal of Epidemiology. 183, 12, p. 1138-1148 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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12 Citations (Scopus)