Projects per year
Personal profile
Biography
Dr. Aswini holds both a Master’s degree and a Ph.D. in Biotechnology from Universiti Malaysia Sabah, Malaysia. Her doctoral research focused on the genetic diversity of green (Chelonia mydas) and hawksbill (Eretmochelys imbricata) turtles, as well as the prevalence of Chelonid Fibropapilloma-associated Herpesvirus (ChHV5) in Mabul Island, Sabah. Through this work, she gained extensive experience in population genetics, molecular diagnostics, and infectious disease genomics.
Currently, she serves as a Research Fellow at Monash University Malaysia, where she specializes in generating high-quality reference genome assemblies using advanced high-throughput sequencing technologies. Her work supports conservation efforts for endangered Malaysian species and involves the development of comprehensive bioinformatics pipelines for genome analysis—including mapping, assembly, variant calling, RNA-Seq analysis, 16S rRNA profiling, and shotgun metagenomics.
In addition to conservation genomics, Dr. Aswini has contributed to human genomics research. She has replicated and executed analyses for the Genomics of Recurrent Pregnancy Loss (GReP) pipeline and performed variant calling analyses for the human Y chromosomal diversity project in collaboration with the University of Padua, Italy. She is currently co-leading a clinical genomics project on congenital cardiomyopathy in collaboration with the National Heart Institute of Malaysia. These experiences have further strengthened her expertise in variant analysis and clinical bioinformatics.
Her current projects at Monash are aligned with global initiatives such as the Vertebrate Genome Project (VGP) and the Earth BioGenome Project. She also provides bioinformatics and computational support to both internal and external collaborators and mentors students engaged in bioinformatics research. In addition, she is proficient in wet lab protocols, including high molecular weight DNA extraction, library preparation, and sequencing using the PacBio Sequel IIe, Oxford Nanopore’s MinION and PromethION 2 Solo platforms, as well as Hi-C library preparation.
Qualifications
- PhD. Biotechnology, Universiti Malaysia Sabah, 2019
- Master of Science. Biotechnology, Universiti Malaysia Sabah, 2015
- Bachelor of Science (Hons.) Biomedical Sciences, Management and Science University (MSU), 2012
Expertise
Bioinformatic, Genomics, Animal genetic, Population genetic, Conservation genetic,
Professional Experience
- Research Fellow (Genomics), Monash University Malaysia - Sep 2020 - Present
- Research Assistant, Biotechnology Research Institute - May 2012 - Apr 2014
- Research Assistant, Public Health Institute - Sep 2011 - Aug 2012
- Medical Laboratory Technologist, Putri Specialist Hospital - 2009 - 2010
Professional Affiliation
Malaysia Genetic Society - Since 2014- present
Monash teaching commitment
Subject: BIN3800-MA-S1
Information: Introduction to Bioinformatics unit aims to cover the computational analyses of genomics and other similar biologically relevant big datasets. The unit explores the application of on-line tools and computational methods to harness data in biomedical and biological sciences, particularly in genomics and proteomics.
Subject: BIN3890-MA-S2
Information: In Research Methods in Bioinformatics and Big Data students will apply the knowledge and analytical skills learnt in BIN3800 to carry out an in-depth computational analysis of existing genomics, transcriptomics or proteomics datasets.
Others:
Support undergraduate students enrolled in BIN3800 and BIN3890. Providing bioinformatics support to staff and HDR students enrolled in the School of Science for their genome related projects
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Research area keywords
- Genomics & Transcriptomics
- Bioinformatics
- Sequence analysis
Collaborations and top research areas from the last five years
Projects
- 2 Finished
-
Conservation genomics for Helmeted and Rhinoceros hornbills in Malaysia
Leela, A. (Chief Investigator (CI)), Ayub, Q. (Primary Chief Investigator (PCI)), Rahman, S. (Chief Investigator (CI)), Dingle, C. (Chief Investigator (CI)), Hatten, C. E. R. (Chief Investigator (CI)) & Kaur, R. (Chief Investigator (CI))
1/07/23 → 30/06/25
Project: Research
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Genomics and immunogenetics assessment of Malayan Tiger
Ayub, Q. (Primary Chief Investigator (PCI)), Sitam, F. T. (Partner Investigator (PI)) & Leela, A. (Chief Investigator (CI))
1/03/23 → 1/03/25
Project: Research
Research output
- 3 Article
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Increased prevalence and new evidence of multi-species chelonid herpesvirus 5 (ChHV5) infection in the sea turtles of Mabul island, Borneo
Robben, D. M., Palaniappan, P., Loganathan, A. L. & Subbiah, V. K., 2 Jan 2023, In: Animals. 13, 2, 10 p., 290.Research output: Contribution to journal › Article › Research › peer-review
Open AccessFile5 Citations (Scopus) -
First evidence of chelonid herpesvirus 5 (Chhv5) infection in green turtles (Chelonia mydas) from Sabah, Borneo
Loganathan, A. L., Palaniappan, P. & Subbiah, V. K., Nov 2021, In: Pathogens. 10, 11, 20 p., 1404.Research output: Contribution to journal › Article › Research › peer-review
Open AccessFile10 Citations (Scopus) -
Disease risk analysis in sea turtles: A baseline study to inform conservation efforts
Mashkour, N., Jones, K., Kophamel, S., Hipolito, T., Ahasan, S., Walker, G., Jakob-Hoff, R., Whittaker, M., Hamann, M., Bell, I., Elliman, J., Owens, L., Saladin, C., Crespo-Picazo, J. L., Gardner, B., Loganathan, A. L., Bowater, R., Young, E., Robinson, D. & Baverstock, W. & 16 others, , 23 Oct 2020, In: PLoS ONE. 15, 10 , 32 p., e0230760.Research output: Contribution to journal › Article › Research › peer-review
Open AccessFile30 Citations (Scopus)
Prizes
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2023 Research Platforms Excellence Award
Leela, A. (Recipient), 28 Nov 2023
Prize: Prize (including medals and awards)
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Monash University Malaysia Genomics Platform (MUMGP) Open Day 2024
Leela, A. (Contributor)
25 Apr 2024Activity: Community Talks, Presentations, Exhibitions and Events › Public event
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Wildlife Photography: Malaysia’s Living Treasures: A Journey Through Nature
Leela, A. (Contributor)
11 Nov 2024 → 13 Nov 2024Activity: Community Talks, Presentations, Exhibitions and Events › Public event
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Wellcome Connecting Science: Next Generation Sequencing Bioinformatics - Asia 2024
Leela, A. (Organiser)
3 Nov 2024 → 8 Nov 2024Activity: Participating in or organising an event types › Contribution to workshop, seminar, course
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MUFY Immersion Day 2024
Leela, A. (Contributor)
15 Apr 2024Activity: Community Talks, Presentations, Exhibitions and Events › Public event
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SIDC Workshop
Leela, A. (Organiser)
21 Oct 2024 → 1 Nov 2024Activity: Participating in or organising an event types › Contribution to workshop, seminar, course