Research Output 1998 2019

2019

A Comprehensive Framework to Capture the Arcana of Neuroimaging Analysis

Close, T. G., Ward, P. G. D., Sforazzini, F., Goscinski, W., Chen, Z. & Egan, G. F., 24 Jun 2019, (Accepted/In press) In : Neuroinformatics. 21 p.

Research output: Contribution to journalArticleResearchpeer-review

Advanced age promotes colonic dysfunction and gut-derived lung infection after stroke

Wen, S. W., Shim, R., Ho, L., Wanrooy, B. J., Srikhanta, Y., Prame Kumar, K., Nicholls, A. J., Shen, S., Sepehrizadeh, T., De Veer, M., Srikanth, V., Ma, H., Phan, T., Lyras, D. & Wong, C., 1 Oct 2019, In : Aging Cell. 18, 5, 13 p., e12980.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Advanced MRI analysis to detect white matter brain injury in growth restricted newborn lambs

Malhotra, A., Sepehrizadeh, T., Dhollander, T., Wright, D., Castillo-Melendez, M., Sutherland, A. E., Pham, Y., Ditchfield, M., Polglase, G. R., de Veer, M., Jenkin, G., Pannek, K., Shishegar, R. & Miller, S. L., 1 Jan 2019, In : NeuroImage: Clinical. 24, 9 p., 101991.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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A guide to group effective connectivity analysis, part 1: First level analysis with DCM for fMRI

Zeidman, P., Jafarian, A., Corbin, N., Seghier, M. L., Razi, A., Price, C. J. & Friston, K. J., 15 Oct 2019, In : NeuroImage. 200, p. 174-190 17 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Altered Cortical Morphometry in Pre-manifest Huntington’s Disease: Cross-sectional Data from the IMAGE-HD Study

Shishegar, R., Rajapakse, S. & Georgiou-Karistianis, N., 2019. 1 p.

Research output: Contribution to conferencePosterOtherpeer-review

Bridging the Gap between Connectome and Transcriptome

Fornito, A., Arnatkevičiūtė, A. & Fulcher, B. D., 1 Jan 2019, In : Trends in Cognitive Sciences. 23, 1, p. 34-50 17 p.

Research output: Contribution to journalReview ArticleResearchpeer-review

Dynamic causal modelling of fluctuating connectivity in resting-state EEG

Van de Steen, F., Almgren, H., Razi, A., Friston, K. & Marinazzo, D., 1 Apr 2019, In : NeuroImage. 189, p. 476-484 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Effective connectivity changes in LSD-induced altered states of consciousness in humans

Preller, K. H., Razi, A., Zeidman, P., Stämpfli, P., Friston, K. J. & Vollenweider, F. X., 12 Feb 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 7, p. 2743-2748 6 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Enforcing Structural Similarity in Deep Learning MR Image Reconstruction

Pawar, K., Chen, Z., Shah, J. & Egan, G., May 2019, p. 4711.

Research output: Contribution to conferenceAbstractOtherpeer-review

Functional Brush Poly(2-ethyl-2-oxazine)s: Synthesis by CROP and RAFT, Thermoresponsiveness and Grafting onto Iron Oxide Nanoparticles

Klein, T., Parkin, J., de Jongh, P. A. J. M., Esser, L., Sepehrizadeh, T., Zheng, G., De Veer, M., Alt, K., Hagemeyer, C. E., Haddleton, D. M., Davis, T. P., Thelakkat, M. & Kempe, K., May 2019, In : Macromolecular Rapid Communications. 40, 10, 6 p., 1800911.

Research output: Contribution to journalArticleResearchpeer-review

Functional Connectivity of Corticostriatal Circuitry and Psychosis-like Experiences in the General Community

Sabaroedin, K., Tiego, J., Parkes, L., Sforazzini, F., Finlay, A., Johnson, B., Pinar, A., Cropley, V., Harrison, B. J., Zalesky, A., Pantelis, C., Bellgrove, M. & Fornito, A., 1 Jul 2019, In : Biological Psychiatry. 86, 1, p. 16-24 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Is (poly-) substance use associated with impaired inhibitory control? A mega-analysis controlling for confounders

Liu, Y., van den Wildenberg, W. P. M., de Graaf, Y., Ames, S. L., Baldacchino, A., Bø, R., Cadaveira, F., Campanella, S., Christiansen, P., Claus, E. D., Colzato, L. S., Filbey, F. M., Foxe, J. J., Garavan, H., Hendershot, C. S., Hester, R., Jester, J. M., Karoly, H. C., Kräplin, A., Kreusch, F. & 35 others, Landrø, N. I., Littel, M., Loeber, S., London, E. D., López-Caneda, E., Lubman, D. I., Luijten, M., Marczinski, C. A., Metrik, J., Montgomery, C., Papachristou, H., Mi Park, S., Paz, A. L., Petit, G., Prisciandaro, J. J., Quednow, B. B., Ray, L. A., Roberts, C. A., Roberts, G. M. P., de Ruiter, M. B., Rupp, C. I., Steele, V. R., Sun, D., Takagi, M., Tapert, S. F., van Holst, R. J., Verdejo-Garcia, A., Vonmoos, M., Wojnar, M., Yao, Y., Yücel, M., Zack, M., Zucker, R. A., Huizenga, H. M. & Wiers, R. W., 15 Jul 2019, (Accepted/In press) In : Neuroscience and Biobehavioral Reviews. 17 p.

Research output: Contribution to journalReview ArticleResearchpeer-review

Open Access
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Longitudinal evaluation of iron concentration and atrophy in the dentate nuclei in friedreich ataxia

Ward, P. G. D., Harding, I. H., Close, T. G., Corben, L. A., Delatycki, M. B., Storey, E., Georgiou-Karistianis, N. & Egan, G. F., Mar 2019, In : Movement Disorders. 34, 3, p. 335-343 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Metformin intervention prevents cardiac dysfunction in a murine model of adult congenital heart disease

Wilmanns, J. C., Pandey, R., Hon, O., Chandran, A., Schilling, J. M., Forte, E., Wu, Q., Cagnone, G., Bais, P., Philip, V., Coleman, D., Kocalis, H., Archer, S. K., Pearson, J. T., Ramialison, M., Heineke, J., Patel, H. H., Rosenthal, N. A., Furtado, M. B. & Costa, M. W., Feb 2019, In : Molecular Metabolism. 20, p. 102-114 13 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Mindfulness Meditators Do Not Show Differences in Electrophysiological Measures of Error Processing

Bailey, N. W., Raj, K., Freedman, G., Fitzgibbon, B., Rogasch, N. C., Van Dam, N. T. & Fitzgerald, P. B., 15 Jul 2019, In : Mindfulness. 10, 7, p. 1360-1380 21 p.

Research output: Contribution to journalArticleResearchpeer-review

Mindfulness meditators show altered distributions of early and late neural activity markers of attention in a response inhibition task

Bailey, N., Freedman, G., Raj, K., Sullivan, C., Rogasch, N., Chung, S., Hoy, K., Chambers, R., Hassed, C., Van Dam, N., Koenig, T. & Fitzgerald, P., 6 Aug 2019, In : PLoS ONE. 14, 8, 25 p., e0203096.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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MR-PET head motion correction based on co-registration of multicontrast MR images

Chen, Z., Sforazzini, F., Baran, J., Close, T., Shah, N. J. & Egan, G. F., 1 Jan 2019, (Accepted/In press) In : Human Brain Mapping. 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Network spread determines severity of degeneration and disconnection in Huntington's disease

Poudel, G. R., Harding, I. H., Egan, G. F. & Georgiou-Karistianis, N., 1 Oct 2019, In : Human Brain Mapping. 40, 14, p. 4192-4201 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Neurodevelopmental correlates of the emerging adult self

Davey, C. G., Fornito, A., Pujol, J., Breakspear, M., Schmaal, L. & Harrison, B. J., Apr 2019, In : Developmental Cognitive Neuroscience. 36, 7 p., 100626.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Relating excitatory and inhibitory neurochemicals to visual perception: A magnetic resonance study of occipital cortex between migraine events

Chan, Y. M., Pitchaimuthu, K., Wu, Q-Z., Carter, O. L., Egan, G. F., Badcock, D. R. & McKendrick, A. M., 10 Jul 2019, In : PLoS ONE. 14, 7, 13 p., e0208666.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Reproducibility in TMS-EEG studies: a call for data sharing, standard procedures and effective experimental control

Belardinelli, P., Biabanimoghadam, M., Blumberger, D. M., Bortoletto, M., Casarotto, S., David, O., Desideri, D., Etkin, A., Ferrarelli, F., Fitzgerald, P. B., Fornito, A., Gordon, P. C., Gosseries, O., Harquel, S., Julkunen, P., Keller, C. J., Kimiskidis, V. K., Lioumis, P., Miniussi, C., Rosanova, M. & 1 others, Rogasch, N. C., May 2019, In : Brain Stimulation. 12, 3, p. 787-790 4 p.

Research output: Contribution to journalLetterResearchpeer-review

Open Access
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Sexual Dimorphism of Resting-State Network Connectivity in Healthy Ageing

Jamadar, S., Sforazzini, F., Raniga, P., Ferris, N. J., Paton, B., Bailey, M. J., Brodtmann, A., Yates, P. A., Donnan, G. A., Ward, S. A., Woods, R. L., Storey, E., McNeil, J. J., Egan, G. F. & on behalf of the ASPREE Investigator Group, Oct 2019, In : Journals of Gerontology - Series B Psychological Sciences and Social Sciences. 74, 7, p. 1121-1131 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Simultaneous task-based BOLD-fMRI and [18-F] FDG functional PET for measurement of neuronal metabolism in the human visual cortex

Jamadar, S. D., Ward, P. GD., Li, S., Sforazzini, F., Baran, J., Chen, Z. & Egan, G. F., 1 Apr 2019, In : NeuroImage. 189, p. 258-266 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Staged treatment and acceptability guidelines in early psychosis study (STAGES): A randomized placebo controlled trial of intensive psychosocial treatment plus or minus antipsychotic medication for first-episode psychosis with low-risk of self-harm or aggression. Study protocol and baseline characteristics of participants

O'Donoghue, B., Francey, S. M., Nelson, B., Ratheesh, A., Allott, K., Graham, J., Baldwin, L., Alvarez-Jimenez, M., Thompson, A., Fornito, A., Polari, A., Berk, M., Macneil, C., Crisp, K., Pantelis, C., Yuen, H. P., Harrigan, S. & Mcgorry, P., Aug 2019, In : Early Intervention in Psychiatry. 13, 4, p. 953-960 8 p.

Research output: Contribution to journalArticleOtherpeer-review

Striatal morphology and neurocognitive dysfunction in Huntington disease: the IMAGE-HD study

Wilkes, F. A., Abaryan, Z., Ching, C. R. K., Gutman, B. A., Madsen, S. K., Walterfang, M., Velakoulis, D., Stout, J. C., Chua, P., Egan, G. F., Thompson, P. M., Looi, J. C. L. & Georgiou-Karistianis, N., 30 Sep 2019, In : Psychiatry Research - Neuroimaging. 291, p. 1-8 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Transdiagnostic variations in impulsivity and compulsivity in obsessive-compulsive disorder and gambling disorder correlate with effective connectivity in cortical-striatal-thalamic-cortical circuits

Parkes, L., Tiego, J., Aquino, K., Braganza, L., Chamberlain, S. R., Fontenelle, L. F., Harrison, B. J., Lorenzetti, V., Paton, B., Razi, A., Fornito, A. & Yücel, M., 15 Nov 2019, In : NeuroImage. 202, 10 p., 116070.

Research output: Contribution to journalArticleResearchpeer-review

Variable outcomes of human heart attack recapitulated in genetically diverse mice

Salimova, E., Nowak, K. J., Estrada, A. C., Furtado, M. B., McNamara, E., Nguyen, Q., Balmer, L., Preuss, C., Holmes, J. W., Ramialison, M., Morahan, G. & Rosenthal, N. A., 4 Mar 2019, In : Npj Regenerative Medicine. 4, 15 p., 5.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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2018

Accurate hybrid template-based and MR-based attenuation correction using UTE images for simultaneous PET/MR brain imaging applications

Baran, J., Chen, Z., Sforazzini, F., Ferris, N., Jamadar, S., Schmitt, B., Faul, D., Shah, N. J., Cholewa, M. & Egan, G. F., 6 Nov 2018, In : BMC Medical Imaging. 18, 1, 16 p., 41.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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A critical review of brain and cognitive reserve in Huntington's disease

Soloveva, M. V., Jamadar, S. D., Poudel, G. & Georgiou-Karistianis, N., 1 May 2018, In : Neuroscience and Biobehavioral Reviews. 88, p. 155-169 15 p.

Research output: Contribution to journalReview ArticleResearchpeer-review

A validation of dynamic causal modelling for 7T fMRI

Tak, S., Noh, J., Cheong, C., Zeidman, P., Razi, A., Penny, W. D. & Friston, K. J., 15 Jul 2018, In : Journal of Neuroscience Methods. 305, p. 36-45 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Biophysical modeling of neural plasticity induced by transcranial magnetic stimulation

Wilson, M. T., Fulcher, B. D., Fung, P. K., Robinson, P. A., Fornito, A. & Rogasch, N. C., 1 Jun 2018, In : Clinical Neurophysiology. 129, 6, p. 1230-1241 12 p.

Research output: Contribution to journalReview ArticleResearchpeer-review

Chirp Encoded 3D GRE and MPRAGE Sequences

Pawar, K., Chen, Z., Zhang, J., Shah, N. J. & Egan, G. F., Jun 2018.

Research output: Contribution to conferenceAbstractOtherpeer-review

Open Access

Combining images and anatomical knowledge to improve automated vein segmentation in MRI

Ward, P. G. D., Ferris, N. J., Raniga, P., Dowe, D. L., Ng, A. C. L., Barnes, D. G. & Egan, G. F., 2018, In : NeuroImage. 165, p. 294-605 12 p.

Research output: Contribution to journalArticleResearchpeer-review

Comparison of Rossini–Rothwell and adaptive threshold-hunting methods on the stability of TMS induced motor evoked potentials amplitudes

Dissanayaka, T., Zoghi, M., Farrell, M., Egan, G. & Jaberzadeh, S., Nov 2018, In : Journal of Neuroscience Research. 96, 11, p. 1758-1765 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Computational Approaches to Understanding Mental Dysfunction: Progress, Challenges, and New Frontiers

Fornito, A. & Zalesky, A., 1 Sep 2018, In : Biological Psychiatry: Cognitive Neuroscience and Neuroimaging. 3, 9, p. 728-730 3 p.

Research output: Contribution to journalComment / DebateOtherpeer-review

Crossover design in transcranial direct current stimulation studies on motor learning: Potential pitfalls and difficulties in interpretation of findings

Biabani, M., Farrell, M., Zoghi, M., Egan, G. & Jaberzadeh, S., Jun 2018, In : Reviews in the Neurosciences. 29, 4, p. 463-473 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Deep learning-based whole head segmentation for simultaneous PET/MR attenuation correction

Baran, J. P., Pawar, K., Ferris, N., Jamadar, S., Cholewa, M., Chen, Z. & Egan, G. F., Jun 2018.

Research output: Contribution to conferenceAbstractOtherpeer-review

Differential effect of disease-associated ST8SIA2 haplotype on cerebral white matter diffusion properties in schizophrenia and healthy controls

Fullerton, J. M., Klauser, P., Lenroot, R. K., Shaw, A. D., Overs, B., Heath, A., Cairns, M. J., Atkins, J., Scott, R., The Australian Schizophrenia Research Bank, Schofield, P. R., Weickert, C. S., Pantelis, C., Fornito, A., Whitford, T. J., Weickert, T. W. & Zalesky, A., 1 Dec 2018, In : Translational Psychiatry. 8, 1, 10 p., 21.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Dissociating neural variability related to stimulus quality and response times in perceptual decision-making

Bode, S., Bennett, D., Sewell, D. K., Paton, B., Egan, G. F., Smith, P. L. & Murawski, C., 1 Mar 2018, In : Neuropsychologia. 111, p. 190-200 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Dynamic effective connectivity in resting state fMRI

Park, H-J., Friston, K. J., Pae, C., Park, B. & Razi, A., Oct 2018, In : NeuroImage. 180, B, p. 594-608 15 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Evidence for Training-Dependent Structural Neuroplasticity in Brain-Injured Patients: A Critical Review

Caeyenberghs, K., Clemente, A., Imms, P., Egan, G., Hocking, D. R., Leemans, A., Metzler-Baddeley, C., Jones, D. K. & Wilson, P. H., 1 Feb 2018, In : Neurorehabilitation and Neural Repair. 32, 2, p. 99-114 16 p.

Research output: Contribution to journalReview ArticleResearchpeer-review

From simultaneous to synergistic MR-PET brain imaging: a review of hybrid MR-PET imaging methodologies

Chen, Z., Jamadar, S., Li, S., Sforazzini, F., Baran, J., Ferris, N., Shah, N. J. & Egan, G. F., Dec 2018, In : Human Brain Mapping. 39, 12, p. 5126-5144 19 p.

Research output: Contribution to journalReview ArticleResearchpeer-review

Functional subdivisions within the human intraparietal sulcus are involved in visuospatial transformation in a non‐context‐dependent manner

Papadopoulos, A., Sforazzini, F., Egan, G. & Jamadar, S., Jan 2018, In : Human Brain Mapping. 39, 1, p. 354-368 15 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Impact of different intensities of intermittent theta burst stimulation on the cortical properties during TMS-EEG and working memory performance

Chung, S. W., Rogasch, N. C., Hoy, K. E., Sullivan, C. M., Cash, R. F. H. & Fitzgerald, P. B., 1 Feb 2018, In : Human Brain Mapping. 39, 2, p. 783-802 20 p.

Research output: Contribution to journalArticleResearchpeer-review

Influence of anterior midcingulate cortex on drinking behavior during thirst and following satiation

Saker, P., Farrell, M. J., Egan, G. F., McKinley, M. J. & Denton, D. A., 23 Jan 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 4, p. 786-791 6 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Intertrial RT variability affects level of target-related interference in cued task switching

Provost, A. L., Jamadar, S., Heathcote, A., Brown, S. D. & Karayanidis, F., Mar 2018, In : Psychophysiology. 55, 3, 15 p., e12971.

Research output: Contribution to journalArticleResearchpeer-review

Joint PET+MRI patch-based dictionary for Bayesian random field PET reconstruction

Sudarshan, V. P., Chen, Z. & Awate, S. P., 1 Jan 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018: 21st International Conference, Granada, Spain, Spetember 16-20, 2018, Proceedings, Part I. Frangi, A. F., Schnabel, J. A., Davatzikos, C., Alberola-López, C. & Fichtinger, G. (eds.). Cham, Switzerland: Springer, Vol. 1. p. 338-346 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11070 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference PaperResearchpeer-review

Large-scale network topology reveals heterogeneity in individuals with at risk mental state for psychosis: Findings from the longitudinal youth-at-risk study

Wang, C., Lee, J., Ho, N. F., Lim, J. K. W., Poh, J. S., Rekhi, G., Krishnan, R., Keefe, R. S. E., Adcock, R. A., Wood, S. J., Fornito, A., Chee, M. W. L. & Zhou, J., 1 Dec 2018, In : Cerebral Cortex. 28, 12, p. 4234-4243 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Motion Correction in MRI using Deep Convolutional Neural Networks

Pawar, K., Chen, Z., Shah, N. J. & Egan, G. F., Jun 2018.

Research output: Contribution to conferenceAbstractOtherpeer-review

Open Access