Research Output 1983 2019

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2019

Antibiotic resistance and host immune evasion in Staphylococcus aureus mediated by a metabolic adaptation

Jiang, J-H., Bhuiyan, M. S., Shen, H-H., Cameron, D. R., Rupasinghe, T. W. T., Wu, C. M., Le Brun, A. P., Kostoulias, X., Domene, C., Fulcher, A. J., McConville, M. J., Howden, B. P., Lieschke, G. J. & Peleg, A. Y., 26 Feb 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 9, p. 3722-3727 6 p.

Research output: Contribution to journalArticleResearchpeer-review

Association between plasma antibody responses and risk for Cryptococcus-associated immune reconstitution inflammatory syndrome

Yoon, H. A., Nakouzi, A., Chang, C. C., Kuniholm, M., Carreño, L. J., Wang, T., Ndung'u, T., Lewin, S. R., French, M. A. & Pirofski, L-A., 1 Feb 2019, In : Journal of Infectious Diseases. 219, 3, p. 420-428 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Association of HIV Preexposure Prophylaxis With Incidence of Sexually Transmitted Infections Among Individuals at High Risk of HIV Infection

Traeger, M. W., Cornelisse, V. J., Asselin, J., Price, B., Roth, N. J., Willcox, J., Tee, B. K., Fairley, C. K., Chang, C. C., Armishaw, J., Vujovic, O., Penn, M., Cundill, P., Forgan-Smith, G., Gall, J., Pickett, C., Lal, L., Mak, A., Spelman, T. D., Nguyen, L. & 12 othersMurphy, D. A., Ryan, K. E., El-Hayek, C., West, M., Ruth, S., Batrouney, C., Lockwood, J. T., Hoy, J. F., Hellard, M. E., Stoové, M. A., Wright, E. J. & PrEPX study team, 9 Apr 2019, In : JAMA. 321, 14, p. 1380-1390 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Cardiovascular disease and diabetes in HIV-positive and HIV-negative gay and bisexual men over the age of 55 years in Australia: insights from the Australian Positive & Peers Longevity Evaluation Study

Puhr, R., Petoumenos, K., Huang, R., Templeton, D. J., Woolley, I., Bloch, M., Russell, D., Law, M. G. & Cooper, D. A., 1 Feb 2019, In : HIV Medicine. 20, 2, p. 121-130 10 p.

Research output: Contribution to journalArticleResearchpeer-review

Characterization of Hypermutator Pseudomonas aeruginosa Isolates from Patients with Cystic Fibrosis in Australia

Rees, V. E., Deveson Lucas, D. S., López-Causapé, C., Huang, Y., Kotsimbos, T., Bulitta, J. B., Rees, M. C., Barugahare, A., Peleg, A. Y., Nation, R. L., Oliver, A., Boyce, J. D. & Landersdorfer, C. B., 1 Apr 2019, In : Antimicrobial Agents and Chemotherapy. 63, 4, 11 p., e02538-18.

Research output: Contribution to journalArticleResearchpeer-review

Evidence for a new paradigm of gonorrhoea transmission: Cross-sectional analysis of Neisseria gonorrhoeae infections by anatomical site in both partners in 60 male couples

Cornelisse, V. J., Williamson, D., Zhang, L., Chen, M. Y., Bradshaw, C., Hocking, J. S., Hoy, J., Howden, B. P., Chow, E. P. F. & Fairley, C. K., Apr 2019, (Accepted/In press) In : Sexually Transmitted Infections. 6 p., 053803.

Research output: Contribution to journalArticleResearchpeer-review

Evolution of daptomycin resistance in coagulase-negative staphylococci involves mutations of the essential two-component regulator WALKR

Jiang, J-H., Dexter, C., Cameron, D. R., Monk, I. R., Baines, S. L., Abbott, I. J., Spelman, D. W., Kostoulias, X., Nethercott, C., Howden, B. P. & Peleg, A. Y., 1 Mar 2019, In : Antimicrobial Agents and Chemotherapy. 63, 3, 10 p., e01926-18.

Research output: Contribution to journalArticleResearchpeer-review

Identification of Novel Acinetobacter baumannii Host Fatty Acid Stress Adaptation Strategies

Jiang, J. H., Hassan, K. A., Begg, S. L., Rupasinghe, T. W. T., Naidu, V., Pederick, V. G., Khorvash, M., Whittall, J. J., Paton, J. C., Paulsen, I. T., McDevitt, C. A., Peleg, A. Y. & Eijkelkamp, B. A., 5 Feb 2019, In : mBio. 10, 1, 6 p., e02056-18.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Improving hepatitis C direct-acting antiviral access and uptake: A role for patient-reported outcomes and lived experience

Goutzamanis, S., Doyle, J., Higgs, P. & Hellard, M., 1 Feb 2019, In : Journal of Viral Hepatitis. 26, 2, p. 218-223 6 p.

Research output: Contribution to journalArticleOtherpeer-review

Incidence, Clearance, and Persistence of Anal Human Papillomavirus in Men Who Have Sex With Men Living With Human Immunodeficiency Virus: Implications for Human Papillomavirus Vaccination

Ong, J. J., Walker, S., Grulich, A., Hoy, J., Read, T. R. H., Bradshaw, C., Chen, M., Garland, S. M., Cornall, A., Hillman, R., Templeton, D. J., Hocking, J., Eu, B., Tee, B. K., Chow, E. P. F. & Fairley, C. K., 1 Apr 2019, In : Sexually Transmitted Diseases. 46, 4, p. 229-233 5 p.

Research output: Contribution to journalArticleResearchpeer-review

Outcomes of treatment for hepatitis C in prisoners using a nurse-led, statewide model of care

Papaluca, T., McDonald, L., Craigie, A., Gibson, A., Desmond, P., Wong, D., Winter, R., Scott, N., Howell, J., Doyle, J., Pedrana, A., Lloyd, A., Stoove, M., Hellard, M., Iser, D. & Thompson, A., 1 May 2019, In : Journal of Hepatology. 70, 5, p. 839-846 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Treatment access is only the first step to hepatitis C elimination: experience of universal anti-viral treatment access in Australia

Doyle, J. S., Scott, N., Sacks-Davis, R., Pedrana, A. E., Thompson, A. J., Hellard, M. & the Eliminate Hepatitis C Partnership, 25 Mar 2019, (Accepted/In press) In : Alimentary Pharmacology and Therapeutics.

Research output: Contribution to journalArticleResearchpeer-review

2018

Achieving 90-90-90 Human Immunodeficiency Virus (HIV) Targets Will Not Be Enough to Achieve the HIV Incidence Reduction Target in Australia

Scott, N., Stoové, M., Kelly, S. L., Wilson, D. P. & Hellard, M. E., 1 Apr 2018, In : Clinical Infectious Diseases. 66, 7, p. 1019-1026 8 p.

Research output: Contribution to journalArticleResearchpeer-review

A comprehensive evaluation of Xpert MTB/RIF assay with bronchoalveolar lavage fluid as a single test or combined with conventional assays for diagnosis of pulmonary tuberculosis in China: A two-center prospective study

Pan, X., Yang, S., Deighton, M. A., Qu, Y., Hong, L. & Su, F., 1 Mar 2018, In : Frontiers in Microbiology. 9, MAR, 10 p., 444.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Antibiotic allergy testing improves antibiotic appropriateness in patients with cancer

Trubiano, J. A., Grayson, M. L., Phillips, E. J., Stewardson, A. J., Thursky, K. A. & Slavin, M. A., 1 Nov 2018, In : Journal of Antimicrobial Chemotherapy. 73, 11, p. 3209-3211 3 p.

Research output: Contribution to journalArticleOtherpeer-review

Antibiotic exposure and interpersonal variance mask the effect of ivacaftor on respiratory microbiota composition

Peleg, A. Y., Choo, J. M., Langan, K. M., Edgeworth, D., Keating, D., Wilson, J., Rogers, G. B. & Kotsimbos, T., 1 Jan 2018, In : Journal of Cystic Fibrosis. 17, 1, p. 50-56 7 p.

Research output: Contribution to journalArticleResearchpeer-review

A registry for patients with asplenia/hyposplenism reduces the risk of infections with encapsulated organisms

Arnott, A., Jones, P., Franklin, L. J., Spelman, D., Leder, K. & Cheng, A. C., 15 Aug 2018, In : Clinical Infectious Diseases. 67, 4, p. 557-561 5 p.

Research output: Contribution to journalArticleResearchpeer-review

Beliefs in Antiretroviral Treatment and Self-Efficacy in HIV Management are Associated with Distinctive HIV Treatment Trajectories

Mao, L., de Wit, J., Adam, P., Post, J., Slavin, S., Cogle, A., Wright, E. & Kidd, M., Mar 2018, In : AIDS and Behavior. 22, 3, p. 887-895 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Changes in plasma lipidome following initiation of antiretroviral therapy

Trevillyan, J. M., Wong, G., Puls, R., Petoumenos, K., Emery, S., Mellett, N. A., Mundra, P. A., Meikle, P. J., Hoy, J. F. & for the ALTAIR Study Group, 1 Aug 2018, In : PLoS ONE. 13, 8, 16 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Chronic kidney disease in Australian Human Immunodeficiency Virus-infected patients: Analysis of the Australian HIV Observational Database

Cheung, J., Puhr, R., Petoumenos, K., Cooper, D., Woolley, I. J., Gunathilake, M., Raymond, N., Varma, R., O'Connor, C. & Gracey, D. M., 1 Aug 2018, In : Nephrology. 23, 8, p. 778-786 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Comprehensive antibiotic-linked mutation assessment by resistance mutation sequencing (RM-seq)

Guérillot, R., Li, L., Baines, S., Howden, B., Schultz, M. B., Seemann, T., Monk, I., Pidot, S. J., Gao, W., Giulieri, S., Gonçalves da Silva, A., D'Agata, A., Tomita, T., Peleg, A. Y., Stinear, T. P. & Howden, B. P., 31 Aug 2018, In : Genome Medicine. 10, 1, 15 p., 63.

Research output: Contribution to journalArticleOtherpeer-review

Open Access
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Concomitant medication polypharmacy, interactions and imperfect adherence are common in Australian adults on suppressive antiretroviral therapy

Siefried, K. J., Mao, L., Cysique, L. A., Rule, J., Giles, M. L., Smith, D. E., McMahon, J., Read, T. R., Ooi, C., Tee, B. K., Bloch, M., De Wit, J. & Carr, A., 2 Jan 2018, In : AIDS. 32, 1, p. 35-48 14 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Consumer engagement critical to success in an Australian research project: Reflections from those involved

Synnot, A. J., Cherry, C. L., Summers, M. P., Stuckey, R., Milne, C. A., Lowe, DI. B. & Hill, S. J., 1 Jan 2018, In : Australian Journal of Primary Health. 24, 3, p. 197-203 7 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Open Access
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Convergent evolution driven by rifampin exacerbates the global burden of drug-resistant Staphylococcus aureus

Guérillot, R., da Silva, A. G., Monk, I., Giulieri, S., Tomita, T., Alison, E., Porter, J., Pidot, S., Gao, W., Peleg, A. Y., Seemann, T., Stinear, T. P. & Howden, B. P., 1 Jan 2018, In : mSphere. 3, 1, e00550-17.

Research output: Contribution to journalArticleResearchpeer-review

Delayed diagnosis and complications of predominantly antibody deficiencies in a cohort of Australian adults

Slade, C. A., Bosco, J. J., Giang, T. B., Kruse, E., Stirling, R. G., Cameron, P. U., Hore-Lacy, F., Sutherland, M. F., Barnes, S. L., Holdsworth, S., Ojaimi, S., Unglik, G. A., De Luca, J., Patel, M., McComish, J., Spriggs, K., Tran, Y., Auyeung, P., Nicholls, K., O'Hehir, R. E. & 4 othersHodgkin, P. D., Douglass, J. A., Bryant, V. L. & van Zelm, M. C., 14 May 2018, In : Frontiers in Immunology. 9, MAY, 9 p., 694.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Effect of outpatient antibiotics for urinary tract infections on antimicrobial resistance among commensal Enterobacteriaceae: A multinational prospective cohort study

Stewardson, A. J., Vervoort, J., Adriaenssens, N., Coenen, S., Godycki-Cwirko, M., Kowalczyk, A., Huttner, B. D., Lammens, C., Malhotra-Kumar, S., Goossens, H., Harbarth, S., on behalf of SATURN WP1 Study Group & SATURN WP3 Study Group, Sep 2018, In : Clinical Microbiology and Infection. 24, 9, p. 972–979 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Effect of piperacillin-tazobactam vs meropenem on 30-day mortality for patients with e coli or Klebsiella pneumoniae bloodstream infection and ceftriaxone resistance

Harris, P. N. A., Tambyah, P. A., Lye, D. C., Mo, Y., Lee, T. H., Yilmaz, M., Alenazi, T. H., Arabi, Y., Falcone, M., Bassetti, M., Righi, E., Rogers, B. A., Kanj, S., Bhally, H., Iredell, J., Mendelson, M., Boyles, T. H., Looke, D., Miyakis, S., Walls, G. & 15 othersAl Khamis, M., Zikri, A., Crowe, A., Ingram, P., Daneman, N., Griffin, P., Athan, E., Lorenc, P., Baker, P., Roberts, L., Beatson, S. A., Peleg, A. Y., Harris-Brown, T., Paterson, D. L. & for the MERINO Trial Investigators and the Australasian Society for Infectious Disease Clinical Research Network (ASID-CRN), 11 Sep 2018, In : JAMA - Journal of the American Medical Association. 320, 10, p. 984-994 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Effects of the Australian National Hand Hygiene Initiative after 8 years on infection control practices, health-care worker education, and clinical outcomes: a longitudinal study

Grayson, M. L., Stewardson, A. J., Russo, P. L., Ryan, K. E., Olsen, K. L., Havers, S. M., Greig, S., Cruickshank, M. & on behalf of Hand Hygiene Australia and the National Hand Hygiene Initiative, 1 Nov 2018, In : Lancet Infectious Diseases. 18, 11, p. 1269-1277 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Eliminating hepatitis C: The importance of frequent testing of people who inject drugs in high-prevalence settings

Scott, N., Sacks-Davis, R., Pedrana, A., Doyle, J., Thompson, A. & Hellard, M., 1 Dec 2018, In : Journal of Viral Hepatitis. 25, 12, p. 1472-1480 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Elucidation of the pharmacokinetic/pharmacodynamic determinants of fosfomycin activity against Pseudomonas aeruginosa using a dynamic in vitro model

Bilal, H., Peleg, A. Y., McIntosh, M. P., Styles, I. K., Hirsch, E. B., Landersdorfer, C. B. & Bergen, P. J., 1 Jun 2018, In : Journal of Antimicrobial Chemotherapy. 73, 6, p. 1570-1578 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access

Evaluation of PrEP eligibility criteria using sexually transmissible infections as HIV risk markers at enrolment in PrEPX, a large Australian HIV pre-exposure prophylaxis trial

Cornelisse, V., Fairley, C., Stoove, M., Asselin, J., Chow, E. P. F., Price, B., Roth, N. J., Willcox, J., Penn, M., Tee, BK., Chang, C. C., Armishaw, J., Fogan-Smith, G., Wright, E. J. & PrEPX study team, 28 Nov 2018, In : Clinical Infectious Diseases. 67, 12, p. 1847-1852 6 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access

Evolution of carbapenem resistance in Acinetobacter baumannii during a prolonged infection

Hawkey, J., Ascher, D. B., Judd, L. M., Wick, R. R., Kostoulias, X., Cleland, H., Spelman, D. W., Padiglione, A., Peleg, A. Y. & Holt, K. E., Mar 2018, In : Microbial genomics. 4, 3, 11 p., 000165.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Ex-vivo expression of chemokine receptors on cells surrounding cutaneous nerves in patients with HIV-Associated sensory neuropathy

Mountford, J., Octaviana, F., Estiasari, R., Setiawan, D. D., Ariyanto, I., Lee, S., Gaff, J., Chew, C., Jackaman, C., Kamerman, P., Cherry, C. & Price, P., 20 Feb 2018, In : AIDS. 32, 4, p. 431-441 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Fosfomycin efficacy and emergence of resistance among Enterobacteriaceae in an in vitro dynamic bladder infection model

Abbott, I. J., Meletiadis, J., Belghanch, I., Wijma, R. A., Kanioura, L., Roberts, J. A., Peleg, A. Y. & Mouton, J. W., 1 Mar 2018, In : Journal of Antimicrobial Chemotherapy. 73, 3, p. 709-719 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Funding antiretroviral treatment for HIV-positive temporary residents in Australia prevents transmission and is inexpensive

Gray, R. T., Watson, J., Cogle, A. J., Smith, D. E., Hoy, J. F., Bastian, L. A., Finlayson, R., Drummond, F. M., Whittaker, B., Law, M. G. & Petoumenos, K., 1 Jan 2018, In : Sexual Health. 15, 1, p. 13-19 7 p.

Research output: Contribution to journalArticleResearchpeer-review

Hepatitis C Virus-Infected Patients Receiving Opioid Substitution Therapy Experience Improvement in Patient-Reported Outcomes Following Treatment with Interferon-Free Regimens

Stepanova, M., Thompson, A., Doyle, J., Younossi, I., De Avila, L. & Younossi, Z. M., 13 Mar 2018, In : Journal of Infectious Diseases. 217, 7, p. 1033-1043 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Human Immunization with a Polymorphic Malaria Vaccine Candidate Induced Antibodies to Conserved Epitopes That Promote Functional Antibodies to Multiple Parasite Strains

Feng, G., Boyle, M. J., Cross, N., Chan, J. A., Reiling, L., Osier, F., Stanisic, D. I., Mueller, I., Anders, R. F., McCarthy, J. S., Richards, J. S. & Beeson, J. G., 1 Jul 2018, In : Journal of Infectious Diseases. 218, 1, p. 35-43 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Incorporating digital anorectal examinations for anal cancer screening into routine HIV care for men who have sex with men living with HIV: a prospective cohort study

Ong, J. J., Walker, S., Grulich, A., Hoy, J., Read, T. R., Bradshaw, C., Chen, M., Garland, S. M., Hillman, R., Templeton, D. J., Hocking, J., Eu, B., Tee, B. K., Chow, E. P. F. & Fairley, C. K., 1 Dec 2018, In : Journal of the International AIDS Society. 21, 12, 8 p., e25192.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Individuals with HIV-1 Subtype C Infection and Cryptococcal Meningitis Exhibit Viral Genetic Intermixing of HIV-1 Between Plasma and Cerebrospinal Fluid and a High Prevalence of CXCR4-Using Variants

Sojane, K., Kangethe, R., Chang, C. C., Moosa, M-Y. S., Lewin, S. R., French, M. A. & Ndung'u, T., Jul 2018, In : AIDS Research and Human Retroviruses. 34, 7, p. 607-620 14 p.

Research output: Contribution to journalArticleResearchpeer-review

Initial modelling and updates on cost effectiveness from the first 10 years of a spleen registry

Luu, S., Jones, P., Woolley, I., Spelman, D. & Gold, L., 1 Oct 2018, In : Australian and New Zealand Journal of Public Health. 42, 5, p. 463-466 4 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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In vivo atomic force microscopy–infrared spectroscopy of bacteria

Kochan, K., Perez Guaita, D., Pissang, J., Jiang, J-H., Peleg, A. Y., McNaughton, D., Heraud, P. & Wood, B. R., 1 Jan 2018, In : Journal of the Royal Society Interface. 15, 140, 9 p., 20180115.

Research output: Contribution to journalArticleResearchpeer-review

Levels of regulatory B cells do not predict serological responses to hepatitis B vaccine

Bolther, M., Andersen, K. L. D., Tolstrup, M., Visvanathan, K., Woolley, I., Skinner, N., Millen, R., Warner, N., Østergaard, L. & Jensen-Fangel, S., 11 Apr 2018, In : Human Vaccines and Immunotherapeutics. 14, 6, p. 1483-1488 6 p.

Research output: Contribution to journalArticleResearchpeer-review

Life-long antimicrobial therapy: Where is the evidence?

Lau, J. S. Y., Korman, T. M. & Woolley, I., 1 Jan 2018, In : Journal of Antimicrobial Chemotherapy. 73, 10, p. 2601-2612 12 p.

Research output: Contribution to journalArticleOtherpeer-review

Meropenem Combined with Ciprofloxacin Combats Hypermutable Pseudomonas aeruginosa from Respiratory Infections of Cystic Fibrosis Patients

Rees, V. E., Yadav, R., Rogers, K. E., Bulitta, J. B., Wirth, V., Oliver, A., Boyce, J. D., Peleg, A. Y., Nation, R. L. & Landersdorfer, C. B., 1 Nov 2018, In : Antimicrobial Agents and Chemotherapy. 62, 11, 12 p., e01150-18.

Research output: Contribution to journalArticleResearchpeer-review

Mobile phones and computer keyboards: unlikely reservoirs of multidrug-resistant organisms in the tertiary intensive care unit

Smibert, O. C., Aung, A. K., Woolnough, E., Carter, G. P., Schultz, M. B., Howden, B. P., Seemann, T., Spelman, D., McGloughlin, S. & Peleg, A. Y., 1 Jul 2018, In : Journal of Hospital Infection. 99, 3, p. 295-298 4 p.

Research output: Contribution to journalArticleResearchpeer-review