Research Output 1965 2020

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2017
4 Citations (Scopus)

Development of a cloud-based Bioinformatics Training Platform

Revote, J., Watson-Haigh, N. S., Quenette, S., Bethwaite, B., McGrath, A. & Shang, C. A., 1 May 2017, In : Briefings in Bioinformatics. 18, 3, p. 537-544 8 p.

Research output: Contribution to journalArticleOtherpeer-review

2 Citations (Scopus)

Does combining transit signal priority with dedicated bus lanes or queue jump lanes at multiple intersections create multiplier effects?

Truong, L. T., Currie, G., Wallace, M. & De Gruyter, C., 1 Jan 2017, In : Transportation Research Record-Series. 2647, 1, p. 80-92 13 p.

Research output: Contribution to journalArticleResearchpeer-review

Effects of touch screen mobile devices and e-book systems on students’ reading performance: A usability evidence

Wei, C-C., Lin, Y-C. & Yeh, C-H., Oct 2017, In : Journal of Engineering Technology. 6, p. 58-78 21 p.

Research output: Contribution to journalArticleResearchpeer-review

5 Citations (Scopus)

Efficient parameter learning of Bayesian network classifiers

Zaidi, N. A., Webb, G. I., Carman, M., Petitjean, F., Buntine, W., Hynes, M. & De Sterck, H., 2017, In : Machine Learning. 106, 9-10, p. 1289-1329 41 p.

Research output: Contribution to journalArticleResearchpeer-review

12 Citations (Scopus)

Energetics of trail clearing in the leaf-cutter ant Atta

Bochynek, T., Meyer, B. & Burd, M. C., 1 Jan 2017, In : Behavioral Ecology and Sociobiology. 71, 1, 10 p., 14.

Research output: Contribution to journalArticleResearchpeer-review

1 Citation (Scopus)

Energy-efficient adaptive virtual machine migration mechanism for private Clouds

Sohrabi, S., Yang, Y., Moser, I. & Aleti, A., 25 Sep 2017, In : Concurrency and Computation-Practice & Experience. 29, 18, 10 p., e4170.

Research output: Contribution to journalArticleResearchpeer-review

10 Citations (Scopus)

Enhancing developer recommendation with supplementary information via mining historical commits

Sun, X., Yang, H., Xia, X. & Li, B., 1 Dec 2017, In : Journal of Systems and Software. 134, p. 355-368 14 p.

Research output: Contribution to journalArticleResearchpeer-review

3 Citations (Scopus)

Estimation of the short-term probability of failure in water mains

Chik, L., Albrecht, D. & Kodikara, J., 1 Feb 2017, In : Journal of Water Resources Planning and Management - ASCE. 143, 2, 10 p., 04016075.

Research output: Contribution to journalArticleResearchpeer-review

13 Citations (Scopus)

Exclusive Use Spectrum Access Trading Models in Cognitive Radio Networks: A Survey

Hassan, M. R., Karmakar, G., Kamruzzaman, J. & Srinivasan, B., 2017, In : IEEE Communications Surveys and Tutorials. 19, 4, p. 2192-2231 9 p.

Research output: Contribution to journalArticleResearchpeer-review

3 Citations (Scopus)

Finding discriminative and interpretable patterns in sequences of surgical activities

Forestier, G., Petitjean, F., Senin, P., Riffaud, L., Henaux, P. L. & Jannin, P., Oct 2017, In : Artificial Intelligence in Medicine. 82, p. 11-19 9 p.

Research output: Contribution to journalArticleResearchpeer-review

6 Citations (Scopus)

Force-directed layout of origin-destination flow maps

Jenny, B., Stephen, D. M., Muehlenhaus, I., Marston, B. E., Sharma, R., Zhang, E. & Jenny, H., 2017, In : International Journal of Geographical Information Science. 31, 8, p. 1521–1540 20 p.

Research output: Contribution to journalArticleResearchpeer-review

4 Citations (Scopus)

Ginger and the beetle: Evidence of primitive pollination system in a Himalayan endemic alpine ginger (Roscoea alpina, Zingiberaceae)

Paudel, B. R., Shrestha, M., Dyer, A. G. & Li, Q. J., 19 Jul 2017, In : PLoS ONE. 12, 7, 18 p., e0180460.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Hardness of k-LWE and Applications in Traitor Tracing

Ling, S., Phan, D. H., Stehlé, D. & Steinfeld, R., Dec 2017, In : Algorithmica. 79, 4, p. 1318-1352 35 p.

Research output: Contribution to journalArticleResearchpeer-review

7 Citations (Scopus)

High-dimensional data visualization by interactive construction of low-dimensional parallel coordinate plots

Itoh, T., Kumar, A., Klein, K. & Kim, J., Dec 2017, In : Journal of Visual Languages and Computing. 43, p. 1-13 13 p.

Research output: Contribution to journalArticleResearchpeer-review

9 Citations (Scopus)

HIT'nDRIVE: Patient-specific multidriver gene prioritization for precision oncology

Shrestha, R., Hodzic, E., Sauerwald, T., Dao, P., Wang, K., Yeung, J., Anderson, S., Vandin, F., Haffari, G., Collins, C. C. & Cenk Sahinalp, S., 1 Sep 2017, In : Genome Research. 27, 9, p. 1573-1588 16 p.

Research output: Contribution to journalArticleResearchpeer-review

HIVed, a knowledgebase for differentially expressed human genes and proteins during HIV infection, replication and latency

Li, C., Ramarathinam, S. H., Revote, J., Khoury, G., Song, J. & Purcell, A. W., 30 Mar 2017, In : Scientific Reports. 7, 45509.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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5 Citations (Scopus)

Holographic Graph Neuron: A Bioinspired Architecture for Pattern Processing

Kleyko, D., Osipov, E., Senior, A., Khan, A. I. & Sekercioglu, Y. A., Jun 2017, In : IEEE Transactions on Neural Networks and Learning Systems. 28, 6, p. 1250-1262 13 p.

Research output: Contribution to journalArticleResearchpeer-review

5 Citations (Scopus)

Identifying Features of Fitness Landscapes and Relating Them to Problem Difficulty

Moser, I., Gheorghita, M. & Aleti, A., 1 Sep 2017, In : Evolutionary Computation. 25, 3, p. 407-437 31 p.

Research output: Contribution to journalArticleResearchpeer-review

46 Citations (Scopus)

Immersive collaborative analysis of network connectivity: CAVE-style or head-mounted display?

Cordeil, M., Dwyer, T., Klein, K., Laha, B., Marriott, K. & Thomas, B. H., 1 Jan 2017, In : IEEE Transactions on Visualization and Computer Graphics. 23, 1, p. 441-450 10 p., 7539620.

Research output: Contribution to journalArticleResearchpeer-review

4 Citations (Scopus)

Improved quantification of cerebral vein oxygenation using partial volume correction

Ward, P. G. D., Fan, A. P., Raniga, P., Barnes, D. G., Dowe, D. L., Ng, A. C. L. & Egan, G. F., 27 Feb 2017, In : Frontiers in Neuroscience. 11, 12 p., 89.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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2 Citations (Scopus)

Improving the understanding of spoken referring expressions through syntactic-semantic and contextual-phonetic error-correction

Zukerman, I. & Partovi, A., 1 Nov 2017, In : Computer Speech and Language. 46, p. 284-310 27 p.

Research output: Contribution to journalArticleResearchpeer-review

Investigating subjective experience and the influence of weather among individuals with fibromyalgia: A content analysis of twitter

Delir Haghighi, P., Kang, Y-B., Buchbinder, R., Burstein, F. & Whittle, S., 1 Jan 2017, In : JMIR Public Health and Surveillance. 3, 1, 11 p., e4.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
8 Citations (Scopus)

Investigating the genetic relationship between Alzheimer’s disease and cancer using GWAS summary statistics

Feng, Y. C. A., Cho, K., Lindstrom, S., Kraft, P., Cormack, J., IGAP Consortium, Colorectal Transdisciplinary Study (CORECT), Discovery, Biology, and Risk of Inherited Variants in Breast Cancer (DRIVE), Elucidating Loci Involved in Prostate Cancer Susceptibility (ELLIPSE), Transdisciplinary Research in Cancer of the Lung (TRICL), Cormack, J., Liang, L. & Driver, J. A., 1 Oct 2017, In : Human Genetics. 136, 10, p. 1341-1351 11 p.

Research output: Contribution to journalArticleResearchpeer-review

7 Citations (Scopus)

Knowledge-Transfer learning for prediction of matrix metalloprotease substrate-cleavage sites

Wang, Y., Song, J., Marquez-Lago, T., Leier, A., Li, C., Lithgow, T., Webb, G. I. & Shen, H-B., 1 Dec 2017, In : Scientific Reports. 7, 1, 5755.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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4 Citations (Scopus)
Open Access
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24 Citations (Scopus)

Many-to-many geographically-embedded flow visualisation: An evaluation

Yang, Y., Dwyer, T. G., Goodwin, S. & Marriott, K., Jan 2017, In : IEEE Transactions on Visualization and Computer Graphics. 23, 1, p. 411-420 10 p., 7539669.

Research output: Contribution to journalArticleResearchpeer-review

15 Citations (Scopus)

Mapping species distributions with social media geo-tagged images: case studies of bees and flowering plants in Australia

ElQadi, M. M., Dorin, A., Dyer, A., Burd, M., Bukovac, Z. & Shrestha, M., May 2017, In : Ecological Informatics. 39, p. 23-31 9 p.

Research output: Contribution to journalArticleResearchpeer-review

Melphalan modifies the bone microenvironment by enhancing osteoclast formation

Chai, R. C., McDonald, M. M., Terry, R. L., Kovačić, N., Down, J. M., Mohanty, S. T., Haffari, G., Xu, J., Gillespie, M. T., Rogers, M. J., Price, J. T., Croucher, P. I. & Quinn, J. M. W., 2017, In : Oncotarget. 8, 40, p. 68047-68058 12 p.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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3 Citations (Scopus)
3 Citations (Scopus)

Metalexplorer, a bioinformatics tool for the improved prediction of eight types of metal-binding sites using a random forest algorithm with two-step feature selection

Song, J., Li, C., Zheng, C., Revote, J., Zhang, Z. & Webb, G. I., 2017, In : Current Bioinformatics. 12, 6, p. 480-489 10 p.

Research output: Contribution to journalArticleResearchpeer-review

11 Citations (Scopus)

MiningZinc: a declarative framework for constraint-based mining

Guns, T., Dries, A., Nijssen, S., Tack, G. & De Raedt, L., Mar 2017, In : Artificial Intelligence. 244, p. 6-29 24 p.

Research output: Contribution to journalArticleResearchpeer-review

5 Citations (Scopus)

Modelling risk-adjusted variation in length of stay among Australian and New Zealand ICUs

Straney, L. D., Udy, A. A., Burrell, A., Bergmeir, C., Huckson, S. D., Cooper, D. J. & Pilcher, D. V., 1 May 2017, In : PLoS ONE. 12, 5, 12 p., e0176570.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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1 Citation (Scopus)

Multi-Disciplinary Green IT Archival Analysis: A pathway for future studies

Sedera, D. D., Lokuge, S., Tushi, B. T. & Tan, F. T. C., 1 Dec 2017, In : Communications of the Association for Information Systems. 41, 1, p. 674-733 60 p., 28.

Research output: Contribution to journalArticleResearchpeer-review

4 Citations (Scopus)

Multi-domain evaluation framework for named entity recognition tools

Abdallah, Z. S., Carman, M. J. & Haffari, G., May 2017, In : Computer Speech and Language. 43, p. 34-55 22 p.

Research output: Contribution to journalArticleResearchpeer-review

19 Citations (Scopus)

Muscle Stem Cells Undergo Extensive Clonal Drift during Tissue Growth via Meox1-Mediated Induction of G2 Cell-Cycle Arrest

Nguyen, P. D., Gurevich, D. B., Sonntag, C., Hersey, L., Alaei, S., Nim, H. T., Siegel, A., Hall, T. E., Rossello, F. J., Boyd, S. E., Polo, J. M. & Currie, P. D., 6 Jul 2017, In : Cell Stem Cell. 21, 1, p. 107-119.e6 19 p.

Research output: Contribution to journalArticleResearchpeer-review

Natural-color maps via automated coloring of bivariate grid data

Darbyshire, J. E. & Jenny, B., Sep 2017, In : Computers and Geosciences. 106, p. 130-138 9 p.

Research output: Contribution to journalArticleResearchpeer-review

8 Citations (Scopus)

Optimal information transfer and stochastic resonance in collective decision making

Meyer, B., 1 Jun 2017, In : Swarm Intelligence. 11, 2, p. 131-154 24 p.

Research output: Contribution to journalArticleResearchpeer-review

Optimal sleeping: models and experiments for energy-delay tradeoff

Kamitsos, I., Ha, S., Andrew, L. L. H., Bawa, J., Butnariu, D., Kim, H. & Chiang, M., 2017, In : International Journal of Systems Science: Operations & Logistics. 4, 4, p. 356-371 16 p.

Research output: Contribution to journalArticleResearchpeer-review

11 Citations (Scopus)

Optimizing the sum of maximum earliness and tardiness of the job shop scheduling problem

Yazdani, M., Aleti, A., Khalili, S. M. & Jolai, F., 1 May 2017, In : Computers and Industrial Engineering. 107, p. 12-24 13 p.

Research output: Contribution to journalArticleResearchpeer-review

2 Citations (Scopus)

PAnDE: Averaged n-dependence estimators for positive unlabeled learning

Li, F., Song, J., Li, C., Akutsu, T. & Zhang, Y., Sep 2017, In : ICIC Express Letters, Part B: Applications. 8, 9, p. 1287-1297 11 p.

Research output: Contribution to journalArticleResearchpeer-review

3 Citations (Scopus)

Parallel foraging cycles for different resources in leaf-cutting ants: a clue to the mechanisms of rhythmic activity

Bochynek, T., James, T. L., Meyer, B. & Burd, M., Dec 2017, In : Ecological Entomology. 42, 6, p. 849-852 4 p.

Research output: Contribution to journalArticleResearchpeer-review

14 Citations (Scopus)

Patterns of business intelligence systems use in organizations

Arnott, D., Lizama, F. & Song, Y., 1 May 2017, In : Decision Support Systems. 97, p. 58-68 11 p.

Research output: Contribution to journalArticleResearchpeer-review

17 Citations (Scopus)

PhosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection

Song, J., Wang, H., Wang, J., Leier, A., Marquez-Lago, T., Yang, B., Zhang, Z., Akutsu, T., Webb, G. I. & Daly, R. J., 1 Dec 2017, In : Scientific Reports. 7, 1, 19 p., 6862.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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50 Citations (Scopus)

POSSUM: A bioinformatics toolkit for generating numerical sequence feature descriptors based on PSSM profiles

Wang, J., Yang, B., Revote, J., Leier, A., Marquez-Lago, T. T., Webb, G., Song, J., Chou, K-C. & Lithgow, T., 1 Jan 2017, In : Bioinformatics. 33, 17, p. 2756-2758 3 p.

Research output: Contribution to journalArticleResearchpeer-review

15 Citations (Scopus)

Practical encoder and decoder for power constrained QC LDPC-Lattice codes

Khodaiemehr, H., Sadeghi, M-R. & Sakzad, A., 14 Feb 2017, In : IEEE Transactions on Communications. 65, 2, p. 486-500 15 p., 7762096.

Research output: Contribution to journalArticleResearchpeer-review

1 Citation (Scopus)

P-RAM vs. RP-RAM

Brand, M., 15 Aug 2017, In : Theoretical Computer Science. 689, p. 14-26 13 p.

Research output: Contribution to journalArticleResearchpeer-review

Real-time colouring and filtering with graphics shaders

Vohl, D., Fluke, C. J., Barnes, D. G. & Hassan, A. H., Nov 2017, In : Monthly Notices of the Royal Astronomical Society. 471, 3, p. 3323-3346 24 p.

Research output: Contribution to journalArticleResearchpeer-review

4 Citations (Scopus)

Reductive evolution in outer membrane protein biogenesis has not compromised cell surface complexity in Helicobacter pylori

Webb, C. T., Chandrapala, D., Oslan, S. N., Bamert, R. S., Grinter, R. D., Dunstan, R. A., Gorrell, R. J., Song, J., Strugnell, R. A., Lithgow, T. & Kwok, T., 1 Dec 2017, In : MicrobiologyOpen. 6, 6, 17 p., e00513.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
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Research support for academics: case studies of two Vietnamese universities

Denison, T., Pham, H. T. & Ninh, T. K. T., 2017, In : Library and Information Research. 41, 24, p. 15-43 29 p.

Research output: Contribution to journalArticleResearchpeer-review