Research Output 1970 2019

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2018
2 Citations (Scopus)

Chick muscle development

Scaal, M. & Marcelle, C., 2018, In : International Journal of Developmental Biology. 62, 1-3, p. 123-132 10 p.

Research output: Contribution to journalArticleResearchpeer-review

19 Citations (Scopus)

Control of cardiac jelly dynamics by NOTCH1 and NRG1 defines the building plan for trabeculation

del Monte-Nieto, G., Ramialison, M., Adam, A. A. S., Wu, B., Aharonov, A., D’uva, G., Bourke, L. M., Pitulescu, M. E., Chen, H., de la Pompa, J. L., Shou, W., Adams, R. H., Harten, S. K., Tzahor, E., Zhou, B. & Harvey, R. P., 9 May 2018, In : Nature. 557, 7705, p. 439-445 7 p.

Research output: Contribution to journalArticleResearchpeer-review

Cover Image, Volume 526, Issue 17

Homman-Ludiye, J., Kwan, W. C., de Souza, M. J. & Bourne, J. A., 1 Dec 2018, In : The Journal of comparative neurology. 526, 17

Research output: Contribution to journalArticleOtherpeer-review

1 Citation (Scopus)

Deep multi-region whole-genome sequencing reveals heterogeneity and gene-by-environment interactions in treatment-naive, metastatic lung cancer

Leong, T. L., Gayevskiy, V., Steinfort, D. P., De Massy, M. R., Gonzalez-Rajal, A., Marini, K. D., Stone, E., Chin, V., Havryk, A., Plit, M., Irving, L. B., Jennings, B. R., McCloy, R. A., Jayasekara, W. S. N., Alamgeer, M., Boolell, V., Field, A., Russell, P. A., Kumar, B., Gough, D. J. & 8 others, Szczepny, A., Ganju, V., Rossello, F. J., Cain, J. E., Papenfuss, A. T., Asselin-Labat, M. L., Cowley, M. J. & Watkins, D. N., 7 Mar 2018, In : Oncogene. 38, 10, p. 1661-1675 15 p.

Research output: Contribution to journalArticleResearchpeer-review

3 Citations (Scopus)

Different Fgfs have distinct roles in regulating neurogenesis after spinal cord injury in zebrafish

Goldshmit, Y., Tang, J. K. K. Y., Siegel, A. L., Nguyen, P. D., Kaslin, J., Currie, P. D. & Jusuf, P. R., 17 Nov 2018, In : Neural Development. 13, 1, 14 p., 24.

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2 Citations (Scopus)

Effective macrophage delivery using RAFT copolymer derived nanoparticles

Montgomery, K. S., Davidson, R. W. M., Cao, B., Williams, B., Simpson, G. W., Nilsson, S. K., Chiefari, J. & Fuchter, M. J., 7 Jan 2018, In : Polymer Chemistry. 9, 1, p. 131-137 7 p.

Research output: Contribution to journalArticleResearchpeer-review

11 Citations (Scopus)

Effector CD4+ T cells recognize intravascular antigen presented by patrolling monocytes

Westhorpe, C. L. V., Ursula Norman, M., Hall, P., Snelgrove, S. L., Finsterbusch, M., Li, A., Lo, C., Tan, Z. H., Li, S., Nilsson, S. K., Kitching, A. R. & Hickey, M. J., 1 Dec 2018, In : Nature Communications. 9, 1, 14 p., 747.

Research output: Contribution to journalArticleResearchpeer-review

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12 Citations (Scopus)

Enduring epigenetic landmarks define the cancer microenvironment

Pidsley, R., Lawrence, M. G., Zotenko, E., Niranjan, B., Statham, A., Song, J., Chabanon, R. M., Qu, W., Wang, H., Richards, M., Nair, S. S., Armstrong, N., Nim, H. T., Papargiris, M., Balanathan, P., French, H., Peters, T., Norden, S., Ryan, A., Pedersen, J. & 9 others, Kench, J. G., Daly, R. J., Horvath, L., Stricker, P., Frydenberg, M., Taylor, R. A., Stirzaker, C., Risbridger, G. P. & Clark, S. J., 1 May 2018, In : Genome Research. 28, 5, p. 625-638 14 p.

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4 Citations (Scopus)

Fine Tuning of Canonical Wnt Stimulation Enhances Differentiation of Pluripotent Stem Cells Independent of β-Catenin-Mediated T-Cell Factor Signaling

Chen, J., Nefzger, C. M., Rossello, F., Sun, Y. B. Y., Lim, S. M., Liu, X., De Boer, S., Knaupp, A. S., Li, J., Davidson, K. C., Polo, J. M. & Barberi, T., 1 Jun 2018, In : Stem Cells. 36, 6, p. 822-833 12 p.

Research output: Contribution to journalArticleResearchpeer-review

3 Citations (Scopus)

Full: Ontogenesis and development of the nonhuman primate pulvinar

Homman-Ludiye, J., Kwan, W. C., de Souza, M. J. & Bourne, J. A., 1 Dec 2018, In : Journal of Comparative Neurology. 526, 17, p. 2870-2883 14 p.

Research output: Contribution to journalArticleResearchpeer-review

1 Citation (Scopus)

Genetic variation in the mitogen-activated protein kinase/extracellular signal-regulated kinase pathway affects contact hypersensitivity responses

Legrand, J. M. D., Roy, E., Baz, B., Mukhopadhyay, P., Wong, H. Y., Ram, R., Morahan, G., Walker, G. & Khosrotehrani, K., Sep 2018, In : Journal of Allergy and Clinical Immunology. 142, 3, p. 981-984 4 p.

Research output: Contribution to journalArticleResearchpeer-review

5 Citations (Scopus)

GILZ-dependent modulation of mTORC1 regulates spermatogonial maintenance

La, H. M., Chan, A-L., Legrand, J. M. D., Rossello, F. J., Gangemi, C. G., Papa, A., Cheng, Q., Morand, E. F. & Hobbs, R. M., 1 Sep 2018, In : Development. 145, 18, dev165324.

Research output: Contribution to journalArticleResearchpeer-review

1 Citation (Scopus)

Guidelines and best practices in successfully using Zebrabow for lineage tracing multiple cells within tissues

Nguyen, P. D. & Currie, P. D., 1 Nov 2018, In : Methods. 150, p. 63-67 5 p.

Research output: Contribution to journalArticleOtherpeer-review

3 Citations (Scopus)

Higher order thalamic nuclei resting network connectivity in early schizophrenia and major depressive disorder

Penner, J., Osuch, E. A., Schaefer, B., Théberge, J., Neufeld, R. W. J., Menon, R. S., Rajakumar, N., Bourne, J. A. & Williamson, P. C., 28 Feb 2018, In : Psychiatry Research - Neuroimaging. 272, p. 7-16 10 p.

Research output: Contribution to journalArticleResearchpeer-review

17 Citations (Scopus)

Identification of dynamic undifferentiated cell states within the male germline

La, H. M., Mäkelä, J-A., Chan, A-L., Rossello, F. J., Nefzger, C. M., Legrand, J. M. D., De Seram, M., Polo, J. M. & Hobbs, R. M., 19 Jul 2018, In : Nature Communications. 9, 1, 18 p., 2819.

Research output: Contribution to journalArticleResearchpeer-review

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7 Citations (Scopus)

Inhibition of activin signaling in lung adenocarcinoma increases the therapeutic index of platinum chemotherapy

Marini, K., Croucher, D. R., McCloy, R. A., Vaghjiani, V., Gonzalez-Rajal, A., Hastings, J. F., Chin, V. T., Szczepny, A., Kostyrko, K., Marquez, C., Jayasekara, W. S. N., Alamgeer, M., Boolell, V., Han, J. Z. R., Waugh, T., Lee, H. C., Oakes, S. R., Kumar, B., Harrison, C. A., Hedger, M. P. & 13 others, Lorensuhewa, N., Kita, B., arrow, R. B., Robinson, B. W. S., de Kretser, D. M., Wu, J., Ganju, V., Sweet-Cordero, E. A., Burgess, A., Martelotto, L. G., Rossello, F. J., Cain, J. & Watkins, D. N., 25 Jul 2018, In : Science Translational Medicine. 10, 451, 13 p., eaat3504.

Research output: Contribution to journalArticleResearchpeer-review

6 Citations (Scopus)

In Vivo Function of the Chaperonin TRiC in α-Actin Folding during Sarcomere Assembly

Berger, J., Berger, S., Li, M., Jacoby, A. S., Arner, A., Bavi, N., Stewart, A. G. & Currie, P. D., 9 Jan 2018, In : Cell Reports. 22, 2, p. 313-322 10 p.

Research output: Contribution to journalArticleResearchpeer-review

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In vivo imaging: Shining a light on stem cells in the living animal

Nguyen, P. D. & Currie, P. D., 1 Apr 2018, In : Development (Cambridge). 145, 7, 4 p., dev150441.

Research output: Contribution to journalArticleOtherpeer-review

4 Citations (Scopus)

Lab-on-a-Chip imaging micro-echocardiography (iμEC) for rapid assessment of cardiovascular activity in zebrafish larvae

Fuad, N. M., Kaslin, J. & Wlodkowic, D., 1 Mar 2018, In : Sensors and Actuators B: Chemical. 256, p. 1131-1141 11 p.

Research output: Contribution to journalArticleResearchpeer-review

Length of myelin internodes of individual oligodendrocytes is controlled by microenvironment influenced by normal and input-deprived axonal activities in sensory deprived mouse models

Osanai, Y., Shimizu, T., Mori, T., Hatanaka, N., Kimori, Y., Kobayashi, K., Koyama, S., Yoshimura, Y., Nambu, A. & Ikenaka, K., 1 Nov 2018, In : GLIA. 66, 11, p. 2514-2525 12 p.

Research output: Contribution to journalArticleResearchpeer-review

3 Citations (Scopus)

Long-Term Maintenance of Human Pluripotent Stem Cells on cRGDfK-Presenting Synthetic Surfaces

Lambshead, J. W., Meagher, L., Goodwin, J., Labonne, T., Ng, E., Elefanty, A., Stanley, E., O'Brien, C. M. & Laslett, A. L., 1 Dec 2018, In : Scientific Reports. 8, 1, 16 p., 701.

Research output: Contribution to journalArticleResearchpeer-review

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9 Citations (Scopus)

Macrophages protect Talaromyces marneffei conidia from myeloperoxidase-dependent neutrophil fungicidal activity during infection establishment in vivo

Ellett, F., Pazhakh, V., Pase, L., Benard, E. L., Weerasinghe, H., Azabdaftari, D., Alasmari, S., Andrianopoulos, A. & Lieschke, G. J., 8 Jun 2018, In : PLoS Pathogens. 14, 6, 27 p., e1007063.

Research output: Contribution to journalArticleResearchpeer-review

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Metformin, beta-cell development, and novel processes following beta-cell ablation in zebrafish

Wyett, G., Gibert, Y., Ellis, M., Castillo, H. A., Kaslin, J. & Aston-Mourney, K., 1 Feb 2018, In : Endocrine. 59, 2, p. 419-425 7 p.

Research output: Contribution to journalArticleResearchpeer-review

2 Citations (Scopus)

Method of derivation and differentiation of mouse embryonic stem cells generating synchronous neuronal networks

Gazina, E. V., Morrisroe, E., Mendis, G. D. C., Michalska, A. E., Chen, J., Nefzger, C. M., Rollo, B. N., Reid, C. A., Pera, M. F. & Petrou, S., 1 Jan 2018, In : Journal of Neuroscience Methods. 293, p. 53-58 6 p.

Research output: Contribution to journalArticleResearchpeer-review

1 Citation (Scopus)

miR-196b target screen reveals mechanisms maintaining leukemia stemness with therapeutic potential

Meyer, S. E., Muench, D. E., Rogers, A. M., Newkold, T. J., Orr, E., O’Brien, E., Perentesis, J. P., Doench, J. G., Lal, A., Morris, P. J., Thomas, C. J., Lieberman, J., McGlinn, E., Aronow, B. J., Salomonis, N. & Grimes, H. L., 1 Sep 2018, In : Journal of Experimental Medicine. 215, 8, p. 2115-2136 22 p.

Research output: Contribution to journalArticleResearchpeer-review

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9 Citations (Scopus)

Monitoring hippocampal glycine with the computationally designed optical sensor GlyFS

Zhang, W. H., Herde, M. K., Mitchell, J. A., Whitfield, J. H., Wulff, A. B., Vongsouthi, V., Sanchez-Romero, I., Gulakova, P. E., Minge, D., Breithausen, B., Schoch, S., Janovjak, H., Jackson, C. J. & Henneberger, C., Sep 2018, In : Nature Chemical Biology. 14, 9, p. 861-869 9 p.

Research output: Contribution to journalArticleResearchpeer-review

mRNA Stability Assay Using Transcription Inhibition by Actinomycin D in Mouse Pluripotent Stem Cells

Ratnadiwakara, M. & Anko, M-L., 5 Nov 2018, In : Bio-protocol. 8, 21, 8 p., e3072.

Research output: Contribution to journalArticleOtherpeer-review

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13 Citations (Scopus)

NKX2-5 regulates human cardiomyogenesis via a HEY2 dependent transcriptional network

Anderson, D. J., Kaplan, D. I., Bell, K. M., Koutsis, K., Haynes, J. M., Mills, R. J., Phelan, D. G., Qian, E. L., Leitoguinho, A. R., Arasaratnam, D., Labonne, T., Ng, E. S., Davis, R. P., Casini, S., Passier, R., Hudson, J. E., Porrello, E. R., Costa, M. W., Rafii, A., Curl, C. L. & 9 others, Delbridge, L. M., Harvey, R. P., Oshlack, A., Cheung, M. M., Mummery, C. L., Petrou, S., Elefanty, A. G., Stanley, E. G. & Elliott, D. A., 10 Apr 2018, In : Nature Communications. 9, 1, 13 p., 1373.

Research output: Contribution to journalArticleResearchpeer-review

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53 Citations (Scopus)

Pharmacogenetic stimulation of neuronal activity increases myelination in an axon-specific manner

Mitew, S., Gobius, I., Fenlon, L. R., McDougall, S. J., Hawkes, D., Xing, Y. L., Bujalka, H., Gundlach, A. L., Richards, L. J., Kilpatrick, T. J., Merson, T. D. & Emery, B., 1 Dec 2018, In : Nature Communications. 9, 1, 16 p., 306.

Research output: Contribution to journalArticleResearchpeer-review

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3 Citations (Scopus)

Physiological oxygen culture reveals retention of metabolic memory in human induced pluripotent stem cells

Harvey, A. J., O'Brien, C., Lambshead, J., Sheedy, J. R., Rathjen, J., Laslett, A. L. & Gardner, D. K., 1 Mar 2018, In : PLoS ONE. 13, 3, 19 p., e0193949.

Research output: Contribution to journalArticleResearchpeer-review

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1 Citation (Scopus)

Reduced post-stroke glial scarring in the infant primate brain reflects age-related differences in the regulation of astrogliosis

Teo, L., Boghdadi, A. G., de Souza, M. & Bourne, J. A., 1 Mar 2018, In : Neurobiology of Disease. 111, p. 1-11 11 p.

Research output: Contribution to journalArticleResearchpeer-review

1 Citation (Scopus)

Regulatory landscape of the hox transcriptome

Casaca, A. N. A., Hauswirth, G. M., Bildsoe, H., Mallo, M. & McGlinn, E., 1 Jan 2018, In : International Journal of Developmental Biology. 62, 11-12, p. 693-704 12 p., 62.

Research output: Contribution to journalArticleResearchpeer-review

RNA Immunoprecipitation Assay to Determine the Specificity of SRSF3 Binding to Nanog mRNA

Ratnadiwakara, M. & Anko, M-L., 5 Nov 2018, In : Bio-protocol. 8, 21, 9 p., e3071.

Research output: Contribution to journalArticleOtherpeer-review

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52 Citations (Scopus)

Single-Cell Transcriptional Profiling Reveals Cellular Diversity and Intercommunication in the Mouse Heart

Skelly, D. A., Squiers, G. T., McLellan, M. A., Bolisetty, M. T., Robson, P., Rosenthal, N. A. & Pinto, A. R., 16 Jan 2018, In : Cell Reports. 22, 3, p. 600-610 11 p.

Research output: Contribution to journalArticleResearchpeer-review

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Skeletal malformations of Meox1-deficient zebrafish resemble human Klippel–Feil syndrome

Dauer, M. V. P., Currie, P. D. & Berger, J., Dec 2018, In : Journal of Anatomy. 233, 6, p. 687-695 9 p.

Research output: Contribution to journalArticleResearchpeer-review

12 Citations (Scopus)

Smchd1 regulates long-range chromatin interactions on the inactive X chromosome and at Hox clusters

Jansz, N., Keniry, A., Trussart, M., Bildsoe, H., Beck, T., Tonks, I. D., Mould, A. W., Hickey, P., Breslin, K., Iminitoff, M., Ritchie, M. E., McGlinn, E., Kay, G. F., Murphy, J. M. & Blewitt, M. E., 1 Sep 2018, In : Nature Structural Biology. 25, 9, p. 766-777 12 p.

Research output: Contribution to journalArticleResearchpeer-review

7 Citations (Scopus)

SRSF3 promotes pluripotency through nanog mRNA export and coordination of the pluripotency gene expression program

Ratnadiwakara, M., Archer, S. K., Dent, C. I., Ruiz De Los Mozos, I., Beilharz, T. H., Knaupp, A. S., Nefzger, C. M., Polo, J. M. & Anko, M-L., 9 May 2018, In : eLife. 7, 28 p., e37419.

Research output: Contribution to journalArticleResearchpeer-review

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Subcutaneous injection of pluripotent stem cells in mice

Nagy, K. V. & Nagy, A., 1 Apr 2018, In : Cold Spring Harbor Protocols. 2018, 4, p. 251-252 2 p.

Research output: Contribution to journalArticleOtherpeer-review

12 Citations (Scopus)

TFAP2C regulates transcription in human naive pluripotency by opening enhancers

Pastor, W. A., Liu, W., Chen, D., Ho, J., Kim, R., Hunt, T. J., Lukianchikov, A., Liu, X., Polo, J. M., Jacobsen, S. E. & Clark, A. T., 1 May 2018, In : Nature Cell Biology. 20, 5, p. 553-564 12 p.

Research output: Contribution to journalArticleResearchpeer-review

1 Citation (Scopus)

The ADAMTS5 metzincin regulates zebrafish somite differentiation

Dancevic, C. M., Gibert, Y., Berger, J., Smith, A. D., Liongue, C., Stupka, N., Ward, A. C. & McCulloch, D. R., 7 Mar 2018, In : International Journal of Molecular Sciences. 19, 3, 12 p., 766.

Research output: Contribution to journalArticleResearchpeer-review

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15 Citations (Scopus)

The Ancient Origins of Neural Substrates for Land Walking

Jung, H., Baek, M., D'Elia, K. P., Boisvert, C., Currie, P. D., Tay, B. H., Venkatesh, B., Brown, S. M., Heguy, A., Schoppik, D. & Dasen, J. S., 8 Feb 2018, In : Cell. 172, 4, p. 667-682.e15 16 p.

Research output: Contribution to journalArticleResearchpeer-review

The ATP Transporter VNUT Mediates Induction of Dectin-1-Triggered Candida Nociception

Maruyama, K., Takayama, Y., Sugisawa, E., Yamanoi, Y., Yokawa, T., Kondo, T., Ishibashi, K., Sahoo, B. R., Takemura, N., Mori, Y., Kanemaru, H., Kumagai, Y., Martino, M. M., Yoshioka, Y., Nishijo, H., Tanaka, H., Sasaki, A., Ohno, N., Iwakura, Y., Moriyama, Y. & 3 others, Nomura, M., Akira, S. & Tominaga, M., 31 Aug 2018, In : iScience. 6, p. 306-318 13 p.

Research output: Contribution to journalArticleResearchpeer-review

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3 Citations (Scopus)

The tumor suppressor Hic1 maintains chromosomal stability independent of Tp53

Szczepny, A., Carey, K., McKenzie, L., Jayasekara, W. S. N., Rossello, F., Gonzalez-Rajal, A., McCaw, A. S., Popovski, D., Wang, D., Sadler, A. J., Mahar, A., Russell, P. A., Wright, G., McCloy, R. A., Garama, D. J., Gough, D. J., Baylin, S. B., Burgess, A., Cain, J. E. & Watkins, D. N., 25 Jan 2018, In : Oncogene. 37, p. 1939-1948 10 p.

Research output: Contribution to journalArticleResearchpeer-review

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6 Citations (Scopus)

Toxicological assessment of additively manufactured methacrylates for medical devices in dentistry

Alifui-Segbaya, F., Bowman, J., White, A. R., Varma, S., Lieschke, G. J. & George, R., 15 Sep 2018, In : Acta Biomaterialia. 78, p. 64-77 14 p.

Research output: Contribution to journalArticleResearchpeer-review

10 Citations (Scopus)

Transient visual pathway critical for normal development of primate grasping behavior

Mundinano, I-C., Fox, D. M., Kwan, W. C., Vidaurre, D., Teo, L., Homman-Ludiye, J., Goodale, M. A., Leopold, D. A. & Bourne, J. A., 6 Feb 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 6, p. 1364-1369 6 p.

Research output: Contribution to journalArticleResearchpeer-review

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2 Citations (Scopus)

Trawler Web: An online de novo motif discovery tool for next-generation sequencing datasets

Dang, L. T., Tondl, M., Chiu, M. H. H., Revote, J., Paten, B., Tano, V., Tokolyi, A., Besse, F., Quaife-Ryan, G., Cumming, H., Drvodelic, M. J., Eichenlaub, M. P., Hallab, J. C., Stolper, J. S., Rossello, F. J., Bogoyevitch, M. A., Jans, D. A., Nim, H. T., Porrello, E. R., Hudson, J. E. & 1 others, Ramialison, M., 5 Apr 2018, In : BMC Genomics. 19, 1, 9 p., 238.

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12 Citations (Scopus)

Unsuitable use of DMSO for assessing behavioral endpoints in aquatic model species

Huang, Y., Cartlidge, R., Walpitagama, M., Kaslin, J., Campana, O. & Wlodkowic, D., 15 Feb 2018, In : Science of the Total Environment. 615, p. 107-114 8 p.

Research output: Contribution to journalArticleResearchpeer-review

Visualization of fluorescent protein expression in whole-mount postimplantation-stage mouse embryos

Behringer, R., Gertsenstein, M., Nagy, K. V. & Nagy, A., 1 Mar 2018, In : Cold Spring Harbor Protocols. 2018, 3, p. 171-172 2 p.

Research output: Contribution to journalArticleOtherpeer-review

2017
8 Citations (Scopus)

A GCSFR/CSF3R zebrafish mutant models the persistent basal neutrophil deficiency of severe congenital neutropenia

Pazhakh, V., Clark, S., Keightley, M. C. & Lieschke, G. J., 10 Mar 2017, In : Scientific Reports. 7, 11 p., 44455.

Research output: Contribution to journalArticleResearchpeer-review

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1 Citation (Scopus)

Altered expression of IGF-I system in neurons of the inflamed spinal cord during acute experimental autoimmune encephalomyelitis

Parvaneh Tafreshi, A., Talebi, F., Ghorbani, S., Bernard, C. & Noorbakhsh, F., 1 Oct 2017, In : Journal of Comparative Neurology. 525, 14, p. 3072-3082 11 p.

Research output: Contribution to journalArticleResearchpeer-review